Literature DB >> 10566337

Use of the Extensible Stylesheet Language (XSL) for medical data transformation.

Y H Seol1, S B Johnson, J Starren.   

Abstract

Recently, the Extensible Markup Language (XML) has received growing attention as a simple but flexible mechanism to represent medical data. As XML-based markups become more common there will be an increasing need to transform data stored in one XML markup into another markup. The Extensible Stylesheet Language (XSL) is a stylesheet language for XML. Development of a new mammography reporting system created a need to convert XML output from the MEDLee natural language processing system into a format suitable for cross-patient reporting. This paper examines the capability of XSL as a rule specification language that supports the medical XML data transformation. A set of nine relevant transformations was identified: Filtering, Substitution, Specification, Aggregation, Merging, Splitting, Transposition, Push-down and Pull-up. XSL-based methods for implementing these transformations are presented. The strengths and limitations of XSL are discussed in the context of XML medical data transformation.

Entities:  

Mesh:

Year:  1999        PMID: 10566337      PMCID: PMC2232783     

Source DB:  PubMed          Journal:  Proc AMIA Symp        ISSN: 1531-605X


  6 in total

1.  Data extraction and ad hoc query of an entity-attribute-value database.

Authors:  P M Nadkarni; C Brandt
Journal:  J Am Med Inform Assoc       Date:  1998 Nov-Dec       Impact factor: 4.497

2.  Using the extensible markup language (XML) in automated clinical practice guidelines.

Authors:  A K Dubey; H Chueh
Journal:  Proc AMIA Symp       Date:  1998

3.  SGML and XML as interchange formats for HL7 messages.

Authors:  R H Dolin; W Rishel; P V Biron; J Spinosa; J E Mattison
Journal:  Proc AMIA Symp       Date:  1998

4.  An XML portable chart format.

Authors:  H C Chueh; W F Raila; D A Berkowicz; G O Barnett
Journal:  Proc AMIA Symp       Date:  1998

5.  Aspects of implementing and harmonizing healthcare communication standards.

Authors:  J Dudeck
Journal:  Int J Med Inform       Date:  1998-02       Impact factor: 4.046

6.  Accessing the Columbia Clinical Repository.

Authors:  S B Johnson; G Hripcsak; J Chen; P Clayton
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1994
  6 in total
  5 in total

1.  A knowledge model for the interpretation and visualization of NLP-parsed discharged summaries.

Authors:  M Krauthammer; G Hripcsak
Journal:  Proc AMIA Symp       Date:  2001

2.  Towards health care process description framework: an XML DTD design.

Authors:  P Staccini; M Joubert; J F Quaranta; S Aymard; D Fieschi; M Fieschi
Journal:  Proc AMIA Symp       Date:  2001

3.  Medical markup language (MML) for XML-based hospital information interchange.

Authors:  K Araki; K Ohashi; S Yamazaki; Y Hirose; Y Yamashita; R Yamamoto; K Minagawa; N Sakamoto; H Yoshihara
Journal:  J Med Syst       Date:  2000-06       Impact factor: 4.460

4.  Disseminating natural language processed clinical narratives.

Authors:  Elizabeth S Chen; George Hripcsak; Carol Friedman
Journal:  AMIA Annu Symp Proc       Date:  2006

5.  KAT: a flexible XML-based knowledge authoring environment.

Authors:  Nathan C Hulse; Roberto A Rocha; Guilherme Del Fiol; Richard L Bradshaw; Timothy P Hanna; Lorrie K Roemer
Journal:  J Am Med Inform Assoc       Date:  2005-03-31       Impact factor: 4.497

  5 in total

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