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Literature DB >> 10566334

Mining molecular binding terminology from biomedical text.

Abstract

Automatic access to information regarding macromolecular binding relationships would provide a valuable resource to the biomedical community. We report on a pilot project to mine such information from the molecular biology literature. The program being developed takes advantage of natural language processing techniques and is supported by two repositories of biomolecular knowledge. A formative evaluation has been conducted on a subset of MEDLINE abstracts.

Mesh：

Substances：
DNA-Binding Proteins

Year: 1999 PMID： 10566334 PMCID： PMC2232739

Source DB: PubMed Journal: Proc AMIA Symp ISSN： 1531-605X

5 in total

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19 in total

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Authors: A R Aronson
Journal: Proc AMIA Symp Date: 2001

Review 2. An introduction to information retrieval: applications in genomics.

Authors: P M Nadkarni
Journal: Pharmacogenomics J Date: 2002 Impact factor: 3.550

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Authors: Hongfang Liu; Stephen B Johnson; Carol Friedman
Journal: J Am Med Inform Assoc Date: 2002 Nov-Dec Impact factor: 4.497

4. Discovering protein similarity using natural language processing.

Authors: Indra N Sarkar; Thomas C Rindflesch
Journal: Proc AMIA Symp Date: 2002

5. Representation of roles in biomedical ontologies: a case study in functional genomics.

Authors: Anita Burgun; Olivier Bodenreider; Franck Le Duff; Fouzia Moussouni; Olivier Loreal
Journal: Proc AMIA Symp Date: 2002

6. A study of biomedical concept identification: MetaMap vs. people.

Authors: Wanda Pratt; Meliha Yetisgen-Yildiz
Journal: AMIA Annu Symp Proc Date: 2003

7. Automation of a problem list using natural language processing.

Authors: Stephane Meystre; Peter J Haug
Journal: BMC Med Inform Decis Mak Date: 2005-08-31 Impact factor: 2.796

8. Comparison of vector space model methodologies to reconcile cross-species neuroanatomical concepts.

Authors: P R Srinivas; Shang-Heng Wei; Nello Cristianini; E G Jones; F A Gorin
Journal: Neuroinformatics Date: 2005

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Authors: Joachim Wermter; Udo Hahn
Journal: AMIA Annu Symp Proc Date: 2005

Review 10. A cheminformatic toolkit for mining biomedical knowledge.

Authors: Gus R Rosania; Gordon Crippen; Peter Woolf; David States; Kerby Shedden
Journal: Pharm Res Date: 2007-03-24 Impact factor: 4.200