Literature DB >> 10562736

Crosstalk in plant cell signaling: structure and function of the genetic network.

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Abstract

Cell signaling integrates independent stimuli using connections between biochemical pathways. The sensory apparatus can be represented as a network, and the connections between pathways are termed crosstalk. Here, we describe several examples of crosstalk in plant biology. To formalize the network of signal transduction we evaluated the relevance of mechanistic models used in artificial intelligence. Although the perceptron model of neural networking provides a good description of the process, we suggest that Boolean networks should be used as a starting framework. The Boolean network model allows genetic data to be integrated into the logical network of connections deduced from DNA microarray data.

Year:  1999        PMID: 10562736     DOI: 10.1016/s1360-1385(99)01498-3

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  36 in total

Review 1.  Engineering the plant cell factory for secondary metabolite production.

Authors:  R Verpoorte; R van der Heijden; J Memelink
Journal:  Transgenic Res       Date:  2000       Impact factor: 2.788

Review 2.  Numeric simulation of plant signaling networks.

Authors:  T Genoud; M B Trevino Santa Cruz; J P Métraux
Journal:  Plant Physiol       Date:  2001-08       Impact factor: 8.340

3.  Coordinated plant defense responses in Arabidopsis revealed by microarray analysis.

Authors:  P M Schenk; K Kazan; I Wilson; J P Anderson; T Richmond; S C Somerville; J M Manners
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-10       Impact factor: 11.205

4.  The oxylipin pathway in Arabidopsis.

Authors:  Robert A Creelman; Rao Mulpuri
Journal:  Arabidopsis Book       Date:  2002-08-12

5.  Ectopic expression of EFFECTOR OF TRANSCRIPTION perturbs gibberellin-mediated plant developmental processes.

Authors:  M Ellerström; W Reidt; R Ivanov; J Tiedemann; M Melzer; A Tewes; T Moritz; H-P Mock; F Sitbon; L Rask; H Bäumlein
Journal:  Plant Mol Biol       Date:  2005-11       Impact factor: 4.076

6.  High shoot plasticity favours plant coexistence in herbaceous vegetation.

Authors:  Mari Lepik; Jaan Liira; Kristjan Zobel
Journal:  Oecologia       Date:  2005-09-29       Impact factor: 3.225

7.  Influence of sugars on blue light-induced chloroplast relocations.

Authors:  Agnieszka Katarzyna Banaś; Halina Gabryś
Journal:  Plant Signal Behav       Date:  2007-07

8.  Responses of Helicoverpa armigera to tomato plants previously infected by ToMV or damaged by H. armigera.

Authors:  Li Lin; Tse-Chi Shen; Yi-Hua Chen; Shaw-Yhi Hwang
Journal:  J Chem Ecol       Date:  2008-02-20       Impact factor: 2.626

9.  Isolation, identification and expression analysis of salt-induced genes in Suaeda maritima, a natural halophyte, using PCR-based suppression subtractive hybridization.

Authors:  Binod B Sahu; Birendra P Shaw
Journal:  BMC Plant Biol       Date:  2009-06-05       Impact factor: 4.215

10.  Heterologous oligonucleotide microarrays for transcriptomics in a non-model species; a proof-of-concept study of drought stress in Musa.

Authors:  Mark W Davey; Neil S Graham; Bartel Vanholme; Rony Swennen; Sean T May; Johan Keulemans
Journal:  BMC Genomics       Date:  2009-09-16       Impact factor: 3.969

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