Literature DB >> 10556079

Molecular systematics: Perfect SINEs of evolutionary history?

M M Miyamoto1.   

Abstract

Short interspersed repetitive elements - SINEs - are being championed as near-perfect phylogenetic characters; they have recently been used with notable success to resolve some phylogenetic conundrums, but they do have certain limitations that restrict their use as 'perfect' characters for molecular systematics.

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Year:  1999        PMID： 10556079     DOI： 10.1016/s0960-9822(99)80498-9

Source DB:  PubMed          Journal:  Curr Biol        ISSN： 0960-9822            Impact factor:   10.834


  11 in total

1.  Inverse PCR-based method for isolating novel SINEs from genome.

Authors:  Yawei Han; Liping Chen; Lihong Guan; Shunping He
Journal:  Mol Biotechnol       Date:  2014-04       Impact factor: 2.695

2.  A mitochondrial intron in a verongid sponge.

Authors:  Dirk Erpenbeck; Ratih Aryasari; John N A Hooper; Gert Wörheide
Journal:  J Mol Evol       Date:  2014-11-13       Impact factor: 2.395

3.  SINE insertions in cladistic analyses and the phylogenetic affiliations of Tarsius bancanus to other primates.

Authors:  J Schmitz; M Ohme; H Zischler
Journal:  Genetics       Date:  2001-02       Impact factor: 4.562

4.  Retroposon analysis of major cetacean lineages: the monophyly of toothed whales and the paraphyly of river dolphins.

Authors:  M Nikaido; F Matsuno; H Hamilton; R L Brownell; Y Cao; W Ding; Z Zuoyan; A M Shedlock; R E Fordyce; M Hasegawa; N Okada
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

5.  Insertional variability of four transposable elements and population structure of the midge Chironomus riparius (Diptera).

Authors:  Giampaolo Zampicinini; Piero Cervella; Christian Biémont; Gabriella Sella
Journal:  Mol Genet Genomics       Date:  2011-09-08       Impact factor: 3.291

Review 6.  Carnivore-specific SINEs (Can-SINEs): distribution, evolution, and genomic impact.

Authors:  Kathryn B Walters-Conte; Diana L E Johnson; Marc W Allard; Jill Pecon-Slattery
Journal:  J Hered       Date:  2011 Sep-Oct       Impact factor: 2.645

7.  Sauria SINEs: Novel short interspersed retroposable elements that are widespread in reptile genomes.

Authors:  Oliver Piskurek; Christopher C Austin; Norihiro Okada
Journal:  J Mol Evol       Date:  2006-04-11       Impact factor: 2.395

8.  Primate jumping genes elucidate strepsirrhine phylogeny.

Authors:  Christian Roos; Jürgen Schmitz; Hans Zischler
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-12       Impact factor: 11.205

9.  Alu elements and hominid phylogenetics.

Authors:  Abdel-Halim Salem; David A Ray; Jinchuan Xing; Pauline A Callinan; Jeremy S Myers; Dale J Hedges; Randall K Garber; David J Witherspoon; Lynn B Jorde; Mark A Batzer
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-15       Impact factor: 11.205

10.  Phylogenetic analysis of genome rearrangements among five mammalian orders.

Authors:  Haiwei Luo; William Arndt; Yiwei Zhang; Guanqun Shi; Max A Alekseyev; Jijun Tang; Austin L Hughes; Robert Friedman
Journal:  Mol Phylogenet Evol       Date:  2012-08-21       Impact factor: 4.286
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