Literature DB >> 10548058

N5-(L-1-carboxyethyl)-L-ornithine synthase: physical and spectral characterization of the enzyme and its unusual low pKa fluorescent tyrosine residues.

D L Sackett1, S B Ruvinov, J Thompson.   

Abstract

N5-(L-1-carboxyethyl)-L-ornithine synthase [E.C. 1.5.1.24] (CEOS) from Lactococcus lactis has been cloned, expressed, and purified from Escherichia coli in quantities sufficient for characterization by biophysical methods. The NADPH-dependent enzyme is a homotetramer (Mr approximately equal to 140,000) and in the native state is stabilized by noncovalent interactions between the monomers. The far-ultraviolet circular dichroism spectrum shows that the folding pattern of the enzyme is typical of the alpha,beta family of proteins. CEOS contains one tryptophan (Trp) and 19 tyrosines (Tyr) per monomer, and the fluorescence spectrum of the protein shows emission from both Trp and Tyr residues. Relative to N-acetyltyrosinamide, the Tyr quantum yield of the native enzyme is about 0.5. All 19 Tyr residues are titratable and, of these, two exhibit the uncommonly low pKa of approximately 8.5, 11 have pKa approximately 10.75, and the remaining six titrate with pKa approximately 11.3. The two residues with pKa approximately 8.5 contribute approximately 40% of the total tyrosine emission, implying a relative quantum yield >1, probably indicating Tyr-Tyr energy transfer. In the presence of NADPH, Tyr fluorescence is reduced by 40%, and Trp fluorescence is quenched completely. The latter result suggests that the single Trp residue is either at the active site, or in proximity to the sequence GSGNVA, that constitutes the beta alphabeta fold of the nucleotide-binding domain. Chymotrypsin specifically cleaves native CEOS after Phe255. Although inactivated by this single-site cleavage of the subunit, the enzyme retains the capacity to bind NADPH and tetramer stability is maintained. Possible roles in catalysis for the chymotrypsin sensitive loop and for the low pKa Tyr residues are discussed.

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Year:  1999        PMID: 10548058      PMCID: PMC2144144          DOI: 10.1110/ps.8.10.2121

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  30 in total

1.  Circular dichroic analysis of protein conformation: inclusion of the beta-turns.

Authors:  C T Chang; C S Wu; J T Yang
Journal:  Anal Biochem       Date:  1978-11       Impact factor: 3.365

2.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

3.  Estimation of globular protein secondary structure from circular dichroism.

Authors:  S W Provencher; J Glöckner
Journal:  Biochemistry       Date:  1981-01-06       Impact factor: 3.162

4.  Biosynthesis and stereochemical configuration of N5-(1-carboxyethyl)ornithine. An unusual amino acid produced by Streptococcus lactis.

Authors:  S P Miller; J Thompson
Journal:  J Biol Chem       Date:  1987-11-25       Impact factor: 5.157

5.  Identification of N epsilon-[(R)-1-carboxyethyl]-L-lysine in, and the complete structure of, the repeating unit of the O-specific polysaccharide of Providencia alcalifaciens O23.

Authors:  N A Kocharova; E V Vinogradov; S A Borisova; A S Shashkov; Y A Knirel
Journal:  Carbohydr Res       Date:  1998-06       Impact factor: 2.104

6.  Fluorescence of buried tyrosine residues in proteins.

Authors:  V Giancotti; F Quadrifoglio; R W Cowgill; C Crane-Robinson
Journal:  Biochim Biophys Acta       Date:  1980-07-24

7.  N5-(L-1-carboxyethyl)-L-ornithine:NADP+ oxidoreductase from Streptococcus lactis. Purification and partial characterization.

Authors:  J Thompson
Journal:  J Biol Chem       Date:  1989-06-05       Impact factor: 5.157

Review 8.  The design and properties of N-carboxyalkyldipeptide inhibitors of angiotensin-converting enzyme.

Authors:  A A Patchett; E H Cordes
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1985

9.  Four states of tyrosine residues in the fibrinogen molecule.

Authors:  Y Inada; B Blombäck
Journal:  Biochim Biophys Acta       Date:  1978-03-28

10.  N6-(1-carboxyethyl)lysine formation by Streptococcus lactis. Purification, synthesis, and stereochemical structure.

Authors:  J Thompson; S P Miller
Journal:  J Biol Chem       Date:  1988-02-05       Impact factor: 5.157

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