Literature DB >> 10542101

The energetics of T4 lysozyme reveal a hierarchy of conformations.

M Llinás1, B Gillespie, F W Dahlquist, S Marqusee.   

Abstract

We have used native state exchange to examine the energy landscape of the well-characterized protein T4 lysozyme. Although the protein exhibits two-state behavior by traditional probes, the energy landscape determined here is much more complex. The average stability of the C-terminal subdomain is significantly higher than that for the N-terminus suggesting at least two regions of unfolding. At a more detailed level, there appears to be a broad continuum of stabilities throughout each region. The overall subdomain hierarchy of energies does not mirror data on the folding pathway for this protein, challenging the relationship between energy landscapes and folding trajectories.

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Year:  1999        PMID: 10542101     DOI: 10.1038/14956

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  37 in total

1.  An amino acid code for protein folding.

Authors:  J Rumbley; L Hoang; L Mayne; S W Englander
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

2.  Two-state vs. multistate protein unfolding studied by optical melting and hydrogen exchange.

Authors:  L Mayne; S W Englander
Journal:  Protein Sci       Date:  2000-10       Impact factor: 6.725

3.  Propagation of a single destabilizing mutation throughout the Escherichia coli ribonuclease HI native state.

Authors:  Giulietta Spudich; Sonja Lorenz; Susan Marqusee
Journal:  Protein Sci       Date:  2002-03       Impact factor: 6.725

4.  Thermodynamic propensities of amino acids in the native state ensemble: implications for fold recognition.

Authors:  J O Wrabl; S A Larson; V J Hilser
Journal:  Protein Sci       Date:  2001-05       Impact factor: 6.725

5.  Protein hydrogen exchange mechanism: local fluctuations.

Authors:  Haripada Maity; Woon Ki Lim; Jon N Rumbley; S Walter Englander
Journal:  Protein Sci       Date:  2003-01       Impact factor: 6.725

6.  An experimentally determined protein folding energy landscape.

Authors:  Cecilia C Mello; Doug Barrick
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-17       Impact factor: 11.205

7.  The folding transition-state ensemble of a four-helix bundle protein: helix propensity as a determinant and macromolecular crowding as a probe.

Authors:  Harianto Tjong; Huan-Xiang Zhou
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

8.  A protein folding pathway with multiple folding intermediates at atomic resolution.

Authors:  Hanqiao Feng; Zheng Zhou; Yawen Bai
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-25       Impact factor: 11.205

9.  Dynamics of lysozyme structure network: probing the process of unfolding.

Authors:  Amit Ghosh; K V Brinda; Saraswathi Vishveshwara
Journal:  Biophys J       Date:  2007-01-05       Impact factor: 4.033

10.  Partially unfolded forms and non-two-state folding of a beta-sandwich: FHA domain from Arabidopsis receptor kinase-associated protein phosphatase.

Authors:  Xiangyang Liang; Gui-in Lee; Steven R Van Doren
Journal:  J Mol Biol       Date:  2006-09-03       Impact factor: 5.469

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