Literature DB >> 10518939

Molecular architecture of the rod domain of the Dictyostelium gelation factor (ABP120).

P Fucini1, B Köppel, M Schleicher, A Lustig, T A Holak, R Müller, M Stewart, A A Noegel.   

Abstract

The Dictyostelium discoideum gelation factor is a two-chain actin-cross-linking protein that, in addition to an N-terminal actin-binding domain, has a rod domain constructed from six tandem repeats of a 100-residue motif that has an immunoglobulin fold. To define the architecture of the rod domain of gelation factor, we have expressed in E. coli a series of constructs corresponding to different numbers of gelation factor rod repeats and have characterised them by chemical crosslinking, ultracentrifugation, column chromatography, matrix-assisted laser desorption ionisation (MALDI) mass spectrometry and NMR spectroscopy. Fragments corresponding to repeats 1-6 and 5-6 dimerise, whereas repeats 1-5 and single repeats 3 and 4 are monomeric. Repeat 6 interacts weakly and was present as monomer and dimer when analysed by analytical ultracentrifugation. Proteolytic digestion of rod5-6 resulted in the generation of two polypeptides that roughly corresponded to rod5 and part of rod6. None of these polypeptides formed dimers after chemical crosslinking. Stable dimerisation therefore appears to require repeats 5 and 6. Based on these data a model of gelation factor architecture is presented. We suggest an arrangement of the chains where only the carboxy-terminal repeats interact as was observed for filamin/ABP280, the mammalian homologue of gelation factor.

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Year:  1999        PMID: 10518939     DOI: 10.1006/jmbi.1999.3046

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  10 in total

Review 1.  Filamins in mechanosensing and signaling.

Authors:  Ziba Razinia; Toni Mäkelä; Jari Ylänne; David A Calderwood
Journal:  Annu Rev Biophys       Date:  2012-02-23       Impact factor: 12.981

2.  Exploring the energy landscape of GFP by single-molecule mechanical experiments.

Authors:  Hendrik Dietz; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-05       Impact factor: 11.205

3.  Protein structure by mechanical triangulation.

Authors:  Hendrik Dietz; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-23       Impact factor: 11.205

4.  Direct observation of active protein folding using lock-in force spectroscopy.

Authors:  Michael Schlierf; Felix Berkemeier; Matthias Rief
Journal:  Biophys J       Date:  2007-08-17       Impact factor: 4.033

5.  Cell type-specific filamin complex regulation by a novel class of HECT ubiquitin ligase is required for normal cell motility and patterning.

Authors:  Simone L Blagg; Suzanne E Battom; Sarah J Annesley; Thomas Keller; Katie Parkinson; Jasmine M F Wu; Paul R Fisher; Christopher R L Thompson
Journal:  Development       Date:  2011-03-09       Impact factor: 6.868

Review 6.  Filamin A: Insights into its Exact Role in Cancers.

Authors:  Qian-Qian Shao; Tai-Ping Zhang; Wen-Jing Zhao; Zi-Wen Liu; Lei You; Li Zhou; Jun-Chao Guo; Yu-Pei Zhao
Journal:  Pathol Oncol Res       Date:  2015-09-05       Impact factor: 3.201

7.  Regulation of the actin cytoskeleton by an interaction of IQGAP related protein GAPA with filamin and cortexillin I.

Authors:  Subhanjan Mondal; Bhagyashri Burgute; Daniela Rieger; Rolf Müller; Francisco Rivero; Jan Faix; Michael Schleicher; Angelika A Noegel
Journal:  PLoS One       Date:  2010-11-10       Impact factor: 3.240

8.  Genomic analysis of the TRIM family reveals two groups of genes with distinct evolutionary properties.

Authors:  Marco Sardiello; Stefano Cairo; Bianca Fontanella; Andrea Ballabio; Germana Meroni
Journal:  BMC Evol Biol       Date:  2008-08-01       Impact factor: 3.260

9.  Nesprin-2 Interacts with Condensin Component SMC2.

Authors:  Xin Xing; Carmen Mroß; Linlin Hao; Martina Munck; Alexandra Herzog; Clara Mohr; C P Unnikannan; Pranav Kelkar; Angelika A Noegel; Ludwig Eichinger; Sascha Neumann
Journal:  Int J Cell Biol       Date:  2017-12-27

Review 10.  Protein folding on the ribosome studied using NMR spectroscopy.

Authors:  Christopher A Waudby; Hélène Launay; Lisa D Cabrita; John Christodoulou
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-07-27       Impact factor: 9.795

  10 in total

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