Literature DB >> 10508942

Comparison of Nitrosospira strains isolated from terrestrial environments.

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Abstract

Most of our knowledge about the physiology of ammonia-oxidizing bacteria is based on experiments with Nitrosomonas europaea, which appears to be less ubiquitous than Nitrosospira. We have isolated Nitrosospiras from widely different environments and compared their specific growth rate, substrate affinity, urease activity, temperature response, pH tolerance and cell morphology. Two of the strains had a variable morphology: the spirals were less tightly coiled than the classical Nitrosospira type and a fraction of the culture had a vibrioid appearance. These vibrioid strains were also peculiar in having a much higher apparent activation energy for ammonia monooxygenase (AMO) (129 and 151 kJ mol(-1)) than that of the more classical Nitrosospiras (78 and 79 kJ mol(-1)). The differences in morphology and activation energy were congruent with the phylogeny of the genes for 16S rRNA (Utåker et al., System. Appl. Microbiol. 18) and AMO. The response to pH in the medium was investigated for four strains. The oxidation rate at the onset of the pH exposure experiment was found to obey classical steady state enzyme kinetics, assuming that NH(3) (not NH(4)(+)) is the rate-limiting substrate. The calculated half saturation constants (K(s)) for AMO were 6-11 µM NH(3). Growth had a narrower pH range than oxidation activity and appeared to be restricted by pH-dependent factors other than NH(3). All the isolated strains were urease positive, with a specific urease activity ranging from 60 to 158% of their specific AMO activity. The urease activity was unaffected by acetylene inhibition of the energy metabolism. The substrate affinity for one strain was found to be around 670 µM.

Entities:  

Year:  1999        PMID: 10508942     DOI: 10.1111/j.1574-6941.1999.tb00646.x

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  46 in total

1.  Niche specialization of terrestrial archaeal ammonia oxidizers.

Authors:  Cécile Gubry-Rangin; Brigitte Hai; Christopher Quince; Marion Engel; Bruce C Thomson; Phillip James; Michael Schloter; Robert I Griffiths; James I Prosser; Graeme W Nicol
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-08       Impact factor: 11.205

2.  Evidence for different contributions of archaea and bacteria to the ammonia-oxidizing potential of diverse Oregon soils.

Authors:  Anne E Taylor; Lydia H Zeglin; Sandra Dooley; David D Myrold; Peter J Bottomley
Journal:  Appl Environ Microbiol       Date:  2010-10-01       Impact factor: 4.792

3.  Enrichment and characterization of an autotrophic ammonia-oxidizing archaeon of mesophilic crenarchaeal group I.1a from an agricultural soil.

Authors:  Man-Young Jung; Soo-Je Park; Deullae Min; Jin-Seog Kim; W Irene C Rijpstra; Jaap S Sinninghe Damsté; Geun-Joong Kim; Eugene L Madsen; Sung-Keun Rhee
Journal:  Appl Environ Microbiol       Date:  2011-10-14       Impact factor: 4.792

4.  Phylogenetically distinct phylotypes modulate nitrification in a paddy soil.

Authors:  Jun Zhao; Baozhan Wang; Zhongjun Jia
Journal:  Appl Environ Microbiol       Date:  2015-02-27       Impact factor: 4.792

5.  Nitrification in a biofilm at low pH values: role of in situ microenvironments and acid tolerance.

Authors:  Armin Gieseke; Sheldon Tarre; Michal Green; Dirk de Beer
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

6.  Responses of nitrification and ammonia-oxidizing bacteria to reciprocal transfers of soil between adjacent coniferous forest and meadow vegetation in the Cascade Mountains of Oregon.

Authors:  P J Bottomley; A E Taylor; S A Boyle; S K McMahon; J J Rich; K Cromack; D D Myrold
Journal:  Microb Ecol       Date:  2004-10-28       Impact factor: 4.552

7.  Changes in nitrogen-fixing and ammonia-oxidizing bacterial communities in soil of a mixed conifer forest after wildfire.

Authors:  Chris M Yeager; Diana E Northup; Christy C Grow; Susan M Barns; Cheryl R Kuske
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

8.  Response of Nitrosospira sp. strain AF-like ammonia oxidizers to changes in temperature, soil moisture content, and fertilizer concentration.

Authors:  Sharon Avrahami; Brendan J M Bohannan
Journal:  Appl Environ Microbiol       Date:  2006-12-08       Impact factor: 4.792

9.  Epiphyton as a niche for ammonia-oxidizing bacteria: detailed comparison with benthic and pelagic compartments in shallow freshwater lakes.

Authors:  M Coci; P L E Bodelier; H J Laanbroek
Journal:  Appl Environ Microbiol       Date:  2008-02-08       Impact factor: 4.792

10.  Influence of starvation on potential ammonia-oxidizing activity and amoA mRNA levels of Nitrosospira briensis.

Authors:  Annette Bollmann; Ingo Schmidt; Aaron M Saunders; Mette H Nicolaisen
Journal:  Appl Environ Microbiol       Date:  2005-03       Impact factor: 4.792

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