Literature DB >> 10498777

K-Estimator: calculation of the number of nucleotide substitutions per site and the confidence intervals.

J M Comeron1.   

Abstract

UNLABELLED: K-Estimator 4.5 is a Windows program that estimates the number of nucleotide substitutions per site (divergence) when comparing two aligned nucleotide sequences, both protein-coding and non-coding. Confidence intervals of the divergence estimates are obtained by Monte Carlo simulation. AVAILABILITY: The program is available for non-profit use via anonymous ftp at ftp.bio.indiana. edu/molbio/mswin. CONTACT: jcomeron@midway.uchicago.edu

Mesh：

Substances：

Year:  1999        PMID： 10498777     DOI： 10.1093/bioinformatics/15.9.763

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  115 in total

1.  Nucleotide polymorphism at the RpII215 gene in Drosophila subobscura. Weak selection on synonymous mutations.

Authors:  A Llopart; M Aguadé
Journal:  Genetics       Date:  2000-07       Impact factor: 4.562

2.  Retroposed new genes out of the X in Drosophila.

Authors:  Esther Betrán; Kevin Thornton; Manyuan Long
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

3.  Orthologs and paralogs of regA, a master cell-type regulatory gene in Volvox carteri.

Authors:  Leonard Duncan; Ichiro Nishii; Alicia Howard; David Kirk; Stephen M Miller
Journal:  Curr Genet       Date:  2006-04-19       Impact factor: 3.886

4.  Sequence variation and haplotype structure at the human HFE locus.

Authors:  Christopher Toomajian; Martin Kreitman
Journal:  Genetics       Date:  2002-08       Impact factor: 4.562

5.  Relative rates of nucleotide substitution in frogs.

Authors:  Andrew J Crawford
Journal:  J Mol Evol       Date:  2003-12       Impact factor: 2.395

6.  Transfer of photosynthesis genes to and from Prochlorococcus viruses.

Authors:  Debbie Lindell; Matthew B Sullivan; Zackary I Johnson; Andrew C Tolonen; Forest Rohwer; Sallie W Chisholm
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-15       Impact factor: 11.205

7.  Characterization of the complex locus of bean encoding polygalacturonase-inhibiting proteins reveals subfunctionalization for defense against fungi and insects.

Authors:  Renato D'Ovidio; Alessandro Raiola; Cristina Capodicasa; Alessandra Devoto; Daniela Pontiggia; Serena Roberti; Roberta Galletti; Eric Conti; Donal O'Sullivan; Giulia De Lorenzo
Journal:  Plant Physiol       Date:  2004-08-06       Impact factor: 8.340

8.  Systematic analysis of plant-specific B3 domain-containing proteins based on the genome resources of 11 sequenced species.

Authors:  Yijun Wang; Dexiang Deng; Rong Zhang; Suxin Wang; Yunlong Bian; Zhitong Yin
Journal:  Mol Biol Rep       Date:  2012-05       Impact factor: 2.316

9.  A tandem duplication of manganese superoxide dismutase in Nosema bombycis and its evolutionary origins.

Authors:  Heng Xiang; Guoqing Pan; Charles R Vossbrinck; Ruizhi Zhang; Jinshan Xu; Tian Li; Zeyang Zhou; Cheng Lu; Zhonghuai Xiang
Journal:  J Mol Evol       Date:  2010-10-23       Impact factor: 2.395

10.  Identification and phylogenetic analysis of late embryogenesis abundant proteins family in tomato (Solanum lycopersicum).

Authors:  Jun Cao; Xiang Li
Journal:  Planta       Date:  2014-12-10       Impact factor: 4.116
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.