Literature DB >> 10491090

The amino-terminal region of the Escherichia coli T-protein of the glycine cleavage system is essential for proper association with H-protein.

K Okamura-Ikeda1, K Fujiwara, Y Motokawa.   

Abstract

T-protein is a component of the glycine cleavage system and catalyzes the tetrahydrofolate-dependent reaction. Our previous work on Escherichia coli T-protein (ET) showed that the lack of the N-terminal 16 residues caused a loss of catalytic activity [Okamura-Ikeda, K., Ohmura, Y., Fujiwara, K. and Motokawa, Y. (1993) Eur. J. Biochem. 216, 539-548]. To define the role of the N-terminal region of ET, a series of deletion mutants were constructed by site-directed mutagenesis and expressed in E. coli. Deletions of the N-terminal 4, 7 and 11 residues led to reduction in the activity to 42, 9 and 4%, respectively, relative to the wild-type enzyme (wtET). The mutant with 7-residue deletion (ETDelta7) was purified and analyzed. ETDelta7 exhibited a marked increase in Km (25-fold) for E. coli H-protein (EH) accompanied by a 10-fold decrease in kcat compared with wtET, indicating the importance of the N-terminal region in the interaction with EH. The role of this region in the ET-EH interaction was investigated by cross-linking of wtET-EH or ETDelta7-EH complex with 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide, a zero-length cross-linker, in the presence of folate substrates. The resulting tripartite cross-linked products were cleaved with lysylendopeptidase and V8 protease. After purification by reversed-phase HPLC, the cross-linked peptides were subjected to Edman sequencing. An intramolecular cross-linking between Asp34 and Lys216 of wtET which was not observed in wtET alone and an intermolecular cross-linking between Lys288 of wtET and Asp-43 of EH were identified. In contrast, no such cross-linking was detected from the cross-linked product of ETDelta7. These results suggest that EH, when it interacts with ET, causes a change in conformation of ET and that the N-terminal region of ET is essential for the conformational change leading to the proper interaction with EH.

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Year:  1999        PMID: 10491090     DOI: 10.1046/j.1432-1327.1999.00637.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  3 in total

1.  Crystal structure of aminomethyltransferase in complex with dihydrolipoyl-H-protein of the glycine cleavage system: implications for recognition of lipoyl protein substrate, disease-related mutations, and reaction mechanism.

Authors:  Kazuko Okamura-Ikeda; Harumi Hosaka; Nobuo Maita; Kazuko Fujiwara; Akiyasu C Yoshizawa; Atsushi Nakagawa; Hisaaki Taniguchi
Journal:  J Biol Chem       Date:  2010-04-06       Impact factor: 5.157

Review 2.  Glycine cleavage system: reaction mechanism, physiological significance, and hyperglycinemia.

Authors:  Goro Kikuchi; Yutaro Motokawa; Tadashi Yoshida; Koichi Hiraga
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2008       Impact factor: 3.493

3.  Structure-based dynamic analysis of the glycine cleavage system suggests key residues for control of a key reaction step.

Authors:  Han Zhang; Yuchen Li; Jinglei Nie; Jie Ren; An-Ping Zeng
Journal:  Commun Biol       Date:  2020-12-11
  3 in total

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