Literature DB >> 10489437

The Sinorhizobium meliloti insertion sequence (IS) element ISRm14 is related to a previously unrecognized IS element located adjacent to the Escherichia coli locus of enterocyte effacement (LEE) pathogenicity island.

S Schneiker1, B Kosier, A Pühler, W Selbitschka.   

Abstract

ISRm14 is 2695 basepairs (bp) in size and bordered by 22 bp imperfect inverted repeats (IRs). A 9-bp target sequence is duplicated upon ISRm14 transposition. The DNA strand that putatively encodes the transposase enzyme carries three open reading frames (ORFs) designated ORFs1 to 3, which specify putative proteins of 15. 9 kDa, 13.1 kDa, and 61.1 kDa, respectively. According to its structural characteristics, ISRm14 belongs to the recently proposed IS66 family of IS elements. The ORFs1 to 3 encoded putative proteins displayed significant similarities to ORFs of the previously unrecognized IS element ISEc8, which is inserted adjacent to the locus of enterocyte effacement (LEE) pathogenicity island of Escherichia coli EDL933. Analyses of the distribution of ISRm14 in a natural S. meliloti population showed its widespread occurrence in 66% of the strains tested with a copy number ranging from 1 to 6.

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Year:  1999        PMID: 10489437     DOI: 10.1007/s002849900459

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  6 in total

1.  Strains of Escherichia coli O157:H7 differ primarily by insertions or deletions, not single-nucleotide polymorphisms.

Authors:  Indira T Kudva; Peter S Evans; Nicole T Perna; Timothy J Barrett; Frederick M Ausubel; Frederick R Blattner; Stephen B Calderwood
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

2.  Nucleotide sequence analysis of the enteropathogenic Escherichia coli adherence factor plasmid pMAR7.

Authors:  Carl Brinkley; Valerie Burland; Rogéria Keller; Debra J Rose; Adam T Boutin; Sara A Klink; Frederick R Blattner; James B Kaper
Journal:  Infect Immun       Date:  2006-09       Impact factor: 3.441

3.  Inference of the impact of insertion sequence (IS) elements on bacterial genome diversification through analysis of small-size structural polymorphisms in Escherichia coli O157 genomes.

Authors:  Tadasuke Ooka; Yoshitoshi Ogura; Md Asadulghani; Makoto Ohnishi; Keisuke Nakayama; Jun Terajima; Haruo Watanabe; Tetsuya Hayashi
Journal:  Genome Res       Date:  2009-06-29       Impact factor: 9.043

4.  Structural and functional characterization of IS679 and IS66-family elements.

Authors:  C G Han; Y Shiga; T Tobe; C Sasakawa; E Ohtsubo
Journal:  J Bacteriol       Date:  2001-07       Impact factor: 3.490

5.  Complete DNA sequence and analysis of the large virulence plasmid of Shigella flexneri.

Authors:  M M Venkatesan; M B Goldberg; D J Rose; E J Grotbeck; V Burland; F R Blattner
Journal:  Infect Immun       Date:  2001-05       Impact factor: 3.441

6.  Identification and characterization of transposable elements of Paracoccus pantotrophus.

Authors:  Dariusz Bartosik; Marta Sochacka; Jadwiga Baj
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

  6 in total

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