Literature DB >> 10471705

Functional overlap between the mec-8 gene and five sym genes in Caenorhabditis elegans.

A G Davies1, C A Spike, J E Shaw, R K Herman.   

Abstract

Earlier work showed that the Caenorhabditis elegans gene mec-8 encodes a regulator of alternative RNA splicing and that mec-8 null mutants have defects in sensory neurons and body muscle attachment but are generally viable and fertile. We have used a genetic screen to identify five mutations in four genes, sym-1-sym-4, that are synthetically lethal with mec-8 loss-of-function mutations. The phenotypes of sym single mutants are essentially wild type. mec-8; sym-1 embryos arrest during embryonic elongation and exhibit defects in the attachment of body muscle to extracellular cuticle. sym-1 can encode a protein containing a signal sequence and 15 contiguous leucine-rich repeats. A fusion of sym-1 and the gene for green fluorescent protein rescued the synthetic lethality of mec-8; sym-1 mutants; the fusion protein was secreted from the apical hypodermal surface of the embryo. We propose that SYM-1 helps to attach body muscle to the extracellular cuticle and that another gene that is dependent upon mec-8 for pre-mRNA processing overlaps functionally with sym-1. RNA-mediated interference experiments indicated that a close relative of sym-1 functionally overlaps both sym-1 and mec-8 in affecting muscle attachment. sym-2, sym-3, and sym-4 appear to provide additional functions that are essential in the absence of mec-8(+).

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Year:  1999        PMID: 10471705      PMCID: PMC1460726     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  45 in total

1.  Mutations in the unc-52 gene responsible for body wall muscle defects in adult Caenorhabditis elegans are located in alternatively spliced exons.

Authors:  T M Rogalski; E J Gilchrist; G P Mullen; D G Moerman
Journal:  Genetics       Date:  1995-01       Impact factor: 4.562

Review 2.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

3.  Cell autonomous expression of perlecan and plasticity of cell shape in embryonic muscle of Caenorhabditis elegans.

Authors:  D G Moerman; H Hutter; G P Mullen; R Schnabel
Journal:  Dev Biol       Date:  1996-01-10       Impact factor: 3.582

Review 4.  The physical map of the Caenorhabditis elegans genome.

Authors:  A Coulson; C Huynh; Y Kozono; R Shownkeen
Journal:  Methods Cell Biol       Date:  1995       Impact factor: 1.441

Review 5.  ACeDB and macace.

Authors:  F H Eeckman; R Durbin
Journal:  Methods Cell Biol       Date:  1995       Impact factor: 1.441

Review 6.  The leucine-rich repeat: a versatile binding motif.

Authors:  B Kobe; J Deisenhofer
Journal:  Trends Biochem Sci       Date:  1994-10       Impact factor: 13.807

7.  The lin-15 locus encodes two negative regulators of Caenorhabditis elegans vulval development.

Authors:  L S Huang; P Tzou; P W Sternberg
Journal:  Mol Biol Cell       Date:  1994-04       Impact factor: 4.138

8.  par-1, a gene required for establishing polarity in C. elegans embryos, encodes a putative Ser/Thr kinase that is asymmetrically distributed.

Authors:  S Guo; K J Kemphues
Journal:  Cell       Date:  1995-05-19       Impact factor: 41.582

9.  The mec-8 gene of C. elegans encodes a protein with two RNA recognition motifs and regulates alternative splicing of unc-52 transcripts.

Authors:  E A Lundquist; R K Herman; T M Rogalski; G P Mullen; D G Moerman; J E Shaw
Journal:  Development       Date:  1996-05       Impact factor: 6.868

10.  Assembly of body wall muscle and muscle cell attachment structures in Caenorhabditis elegans.

Authors:  M C Hresko; B D Williams; R H Waterston
Journal:  J Cell Biol       Date:  1994-02       Impact factor: 10.539

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  30 in total

1.  The diabetes autoantigen ICA69 and its Caenorhabditis elegans homologue, ric-19, are conserved regulators of neuroendocrine secretion.

Authors:  M Pilon; X R Peng; A M Spence; R H Plasterk; H M Dosch
Journal:  Mol Biol Cell       Date:  2000-10       Impact factor: 4.138

2.  Extracellular leucine-rich repeat proteins are required to organize the apical extracellular matrix and maintain epithelial junction integrity in C. elegans.

Authors:  Vincent P Mancuso; Jean M Parry; Luke Storer; Corey Poggioli; Ken C Q Nguyen; David H Hall; Meera V Sundaram
Journal:  Development       Date:  2012-01-25       Impact factor: 6.868

Review 3.  Role of the extracellular matrix in epithelial morphogenesis: a view from C. elegans.

Authors:  Michel Labouesse
Journal:  Organogenesis       Date:  2012-04-01       Impact factor: 2.500

4.  The 2007 George W. Beadle Medal. Robert K. Herman.

Authors:  Victor Ambros
Journal:  Genetics       Date:  2007-02       Impact factor: 4.562

5.  Analysis of smu-1, a gene that regulates the alternative splicing of unc-52 pre-mRNA in Caenorhabditis elegans.

Authors:  C A Spike; J E Shaw; R K Herman
Journal:  Mol Cell Biol       Date:  2001-08       Impact factor: 4.272

6.  The identities of sym-2, sym-3 and sym-4, three genes that are synthetically lethal with mec-8 in Caenorhabditis elegans.

Authors:  John Yochem; Leslie R Bell; Robert K Herman
Journal:  Genetics       Date:  2004-11       Impact factor: 4.562

7.  SMU-2 and SMU-1, Caenorhabditis elegans homologs of mammalian spliceosome-associated proteins RED and fSAP57, work together to affect splice site choice.

Authors:  Angela K Spartz; Robert K Herman; Jocelyn E Shaw
Journal:  Mol Cell Biol       Date:  2004-08       Impact factor: 4.272

Review 8.  The Caenorhabditis elegans epidermis as a model skin. II: differentiation and physiological roles.

Authors:  Andrew D Chisholm; Suhong Xu
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2012-06-19       Impact factor: 5.814

9.  Gene interactions in the DNA damage-response pathway identified by genome-wide RNA-interference analysis of synthetic lethality.

Authors:  Gijs van Haaften; Nadine L Vastenhouw; Ellen A A Nollen; Ronald H A Plasterk; Marcel Tijsterman
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-23       Impact factor: 11.205

10.  Nucleolar proteins suppress Caenorhabditis elegans innate immunity by inhibiting p53/CEP-1.

Authors:  Laura E Fuhrman; Ajay Kumar Goel; Jason Smith; Kevin V Shianna; Alejandro Aballay
Journal:  PLoS Genet       Date:  2009-09-18       Impact factor: 5.917

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