Literature DB >> 10452776

Dense mapping of chromosome 12q13.12-q23.3 and linkage to asthma and atopy.

K C Barnes1, L R Freidhoff, R Nickel, Y F Chiu, S H Juo, N Hizawa, R P Naidu, E Ehrlich, D L Duffy, C Schou, P N Levett, D G Marsh, T H Beaty.   

Abstract

BACKGROUND: Asthma is a complex disease characterized by a high prevalence of allergic diathesis and the almost ubiquitous presence of upper airway disease (eg, rhinitis). Previously, we observed linkage of asthma among Afro-Caribbean families to markers in chromosome 12q, which contains a number of genes encoding for products closely related to allergic airway inflammation and disease.
OBJECTIVE: To identify susceptibility loci in chromosome 12q contributing to the genetics of upper and lower airway diseases and to expand the region to include genes encoding IFN-gamma (IFNG ) and one of the signal transducers and activators of transcription (STAT6 ), we conducted further linkage studies among 33 multiplex families.
METHODS: We characterized 528 subjects from Barbados for asthma; 82% were characterized for allergic rhinitis. Two-point and multipoint linkage analysis of 22 microsatellite markers (spanning approximately 79 centimorgan) was performed.
RESULTS: Affected sib-pair analysis revealed significant evidence for linkage to asthma over approximately 30 cM (P <.05 to.002), with the best evidence for linkage at a CA repeat polymorphism in the first intron of IFNG in 12q21.1 (P =.002). Evidence of linkage to allergic rhinitis was observed in the same region (D12S313, P = 0.006, and IFNGCA, P =.01, respectively). Multipoint linkage analysis also provided evidence for linkage to asthma, with the best nonparametric linkage analysis score at D12S326 (nonparametric linkage score = 3.8, P =.0008). Modest evidence for linkage to allergic rhinitis was observed next to D12S326 at D12S1052 (P =.036).
CONCLUSIONS: Our findings suggest that (1) one or more loci in the chromosome 12q13. 12-q23.3 region are contributing to the expression of the clinical phenotype asthma and the strongest evidence for linkage is in a region near the gene encoding IFNG and (2) a susceptibility locus for both asthma and allergic rhinitis maps to this region.

Entities:  

Mesh:

Year:  1999        PMID: 10452776     DOI: 10.1016/s0091-6749(99)70398-2

Source DB:  PubMed          Journal:  J Allergy Clin Immunol        ISSN: 0091-6749            Impact factor:   10.793


  18 in total

1.  Multipoint linkage-disequilibrium-mapping approach based on the case-parent trio design.

Authors:  K Y Liang; F C Hsu; T H Beaty; K C Barnes
Journal:  Am J Hum Genet       Date:  2001-03-15       Impact factor: 11.025

2.  Linkage at 12q24 with systemic lupus erythematosus (SLE) is established and confirmed in Hispanic and European American families.

Authors:  Swapan K Nath; Ana I Quintero-Del-Rio; Jeff Kilpatrick; Lourdes Feo; Maria Ballesteros; John B Harley
Journal:  Am J Hum Genet       Date:  2003-12-04       Impact factor: 11.025

3.  Linkage analysis with dense SNP maps in isolated populations.

Authors:  Céline Bellenguez; Carole Ober; Catherine Bourgain
Journal:  Hum Hered       Date:  2009-04-09       Impact factor: 0.444

4.  Significant linkage to chromosome 12q24.32-q24.33 and identification of SFRS8 as a possible asthma susceptibility gene.

Authors:  C Brasch-Andersen; Q Tan; A D Børglum; A Haagerup; T R Larsen; J Vestbo; T A Kruse
Journal:  Thorax       Date:  2006-05-31       Impact factor: 9.139

5.  Significant linkage to airway responsiveness on chromosome 12q24 in families of children with asthma in Costa Rica.

Authors:  Juan C Celedón; Manuel E Soto-Quiros; Lydiana Avila; Stephen L Lake; Catherine Liang; Eduardo Fournier; Mitzi Spesny; Craig P Hersh; Jody S Sylvia; Thomas J Hudson; Andrei Verner; Barbara J Klanderman; Nelson B Freimer; Edwin K Silverman; Scott T Weiss
Journal:  Hum Genet       Date:  2006-09-26       Impact factor: 4.132

6.  BAL Cell Gene Expression in Severe Asthma Reveals Mechanisms of Severe Disease and Influences of Medications.

Authors:  Nathaniel Weathington; Michael E O'Brien; Josiah Radder; Thomas C Whisenant; Eugene R Bleecker; William W Busse; Serpil C Erzurum; Benjamin Gaston; Annette T Hastie; Nizar N Jarjour; Deborah A Meyers; Jadranka Milosevic; Wendy C Moore; John R Tedrow; John B Trudeau; Hesper P Wong; Wei Wu; Naftali Kaminski; Sally E Wenzel; Brian D Modena
Journal:  Am J Respir Crit Care Med       Date:  2019-10-01       Impact factor: 21.405

7.  IFNG genotype and sex interact to influence the risk of childhood asthma.

Authors:  Dagan A Loisel; Zheng Tan; Christopher J Tisler; Michael D Evans; Ronald E Gangnon; Daniel J Jackson; James E Gern; Robert F Lemanske; Carole Ober
Journal:  J Allergy Clin Immunol       Date:  2011-07-27       Impact factor: 10.793

8.  Linkage and association of childhood asthma with the chromosome 12 genes.

Authors:  Chenchen Shao; Yoichi Suzuki; Fumiaki Kamada; Kiyoshi Kanno; Mayumi Tamari; Koichi Hasegawa; Yoko Aoki; Shigeo Kure; Xue Yang; Hiroko Endo; Reiko Takayanagi; Chifuyu Nakazawa; Toshio Morikawa; Miki Morikawa; Shigeaki Miyabayashi; Yasushi Chiba; Minoru Karahashi; Seichi Saito; Gen Tamura; Taro Shirakawa; Yoichi Matsubara
Journal:  J Hum Genet       Date:  2004-02-07       Impact factor: 3.172

9.  A multiple splitting approach to linkage analysis in large pedigrees identifies a linkage to asthma on chromosome 12.

Authors:  Céline Bellenguez; Carole Ober; Catherine Bourgain
Journal:  Genet Epidemiol       Date:  2009-04       Impact factor: 2.135

10.  Association study between vitamin D receptor gene polymorphisms and asthma in the Chinese Han population: a case-control study.

Authors:  Ahlem Saadi; Guimin Gao; Huaichen Li; Chunhua Wei; Yaoqin Gong; Qiji Liu
Journal:  BMC Med Genet       Date:  2009-07-21       Impact factor: 2.103

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.