Literature DB >> 10452528

2.0 A X-ray structure of the ternary complex of 7,8-dihydro-6-hydroxymethylpterinpyrophosphokinase from Escherichia coli with ATP and a substrate analogue.

D K Stammers1, A Achari, D O Somers, P K Bryant, J Rosemond, D L Scott, J N Champness.   

Abstract

The X-ray crystal structure of 7,8-dihydro-6-hydroxymethylpterinpyrophosphokinase (PPPK) in a ternary complex with ATP and a pterin analogue has been solved to 2.0 A resolution, giving, for the first time, detailed information of the PPPK/ATP intermolecular interactions and the accompanying conformational change. The first 100 residues of the 158 residue peptide contain a betaalpha betabeta alphabeta motif present in several other proteins including nucleoside diphosphate kinase. Comparative sequence examination of a wide range of prokaryotic and lower eukaryotic species confirms the conservation of the PPPK active site, indicating the value of this de novo folate biosynthesis pathway enzyme as a potential target for the development of novel broad-spectrum anti-infective agents.

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Year:  1999        PMID: 10452528     DOI: 10.1016/s0014-5793(99)00860-1

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  16 in total

1.  Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties.

Authors:  Genbin Shi; Gary Shaw; Yu-He Liang; Priadarsini Subburaman; Yue Li; Yan Wu; Honggao Yan; Xinhua Ji
Journal:  Bioorg Med Chem       Date:  2011-11-23       Impact factor: 3.641

2.  Bisubstrate analog inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: new lead exhibits a distinct binding mode.

Authors:  Genbin Shi; Gary Shaw; Yue Li; Yan Wu; Honggao Yan; Xinhua Ji
Journal:  Bioorg Med Chem       Date:  2012-06-06       Impact factor: 3.641

3.  Catalytic mechanism and allosteric regulation of an oligomeric (p)ppGpp synthetase by an alarmone.

Authors:  Wieland Steinchen; Jan S Schuhmacher; Florian Altegoer; Christopher D Fage; Vasundara Srinivasan; Uwe Linne; Mohamed A Marahiel; Gert Bange
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-12       Impact factor: 11.205

4.  The identification, analysis and structure-based development of novel inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase.

Authors:  Mi-Kyung Yun; Daniel Hoagland; Gyanendra Kumar; M Brett Waddell; Charles O Rock; Richard E Lee; Stephen W White
Journal:  Bioorg Med Chem       Date:  2014-02-25       Impact factor: 3.641

5.  Loop conformation and dynamics of the Escherichia coli HPPK apo-enzyme and its binary complex with MgATP.

Authors:  Rong Yang; Matthew C Lee; Honggao Yan; Yong Duan
Journal:  Biophys J       Date:  2005-04-08       Impact factor: 4.033

Review 6.  Phosphoribosyl Diphosphate (PRPP): Biosynthesis, Enzymology, Utilization, and Metabolic Significance.

Authors:  Bjarne Hove-Jensen; Kasper R Andersen; Mogens Kilstrup; Jan Martinussen; Robert L Switzer; Martin Willemoës
Journal:  Microbiol Mol Biol Rev       Date:  2016-12-28       Impact factor: 11.056

7.  Folate synthesis in higher-plant mitochondria: coupling between the dihydropterin pyrophosphokinase and the dihydropteroate synthase activities.

Authors:  Jean-Marie Mouillon; Stéphane Ravanel; Roland Douce; Fabrice Rébeillé
Journal:  Biochem J       Date:  2002-04-15       Impact factor: 3.857

8.  Crystal structure of the 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase•dihydropteroate synthase bifunctional enzyme from Francisella tularensis.

Authors:  Charles W Pemble; Perdeep K Mehta; Smriti Mehra; Zhenmei Li; Amanda Nourse; Richard E Lee; Stephen W White
Journal:  PLoS One       Date:  2010-11-30       Impact factor: 3.240

9.  Kinetic and structural characterization of a product complex of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase from Escherichia coli.

Authors:  Arnaud Garçon; Alun Bermingham; Lu-Yun Lian; Jeremy P Derrick
Journal:  Biochem J       Date:  2004-06-15       Impact factor: 3.857

10.  Structural enzymology and inhibition of the bi-functional folate pathway enzyme HPPK-DHPS from the biowarfare agent Francisella tularensis.

Authors:  Gary X Shaw; Yue Li; Genbin Shi; Yan Wu; Scott Cherry; Danielle Needle; Di Zhang; Joseph E Tropea; David S Waugh; Honggao Yan; Xinhua Ji
Journal:  FEBS J       Date:  2014-07-23       Impact factor: 5.542

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