Literature DB >> 10449375

In vitro selection of nucleic acids and proteins: What are we learning?

R W Roberts1, W W Ja.   

Abstract

For almost a decade, in vitro selection experiments have been used to isolate novel nucleic acids, peptides and proteins according to their function. Selection experiments have altered our perception of molecular mimicry and catalysis, and they appear to be more facile than rational design at generating biopolymers with desired properties. New methods that have been developed improve the power of functional strategies in ways that nature has already discovered - by expanding library size and facilitating the recombination of positive mutations. Recent structural information on a number of selected and evolved molecules highlights future challenges for design via rational approaches.

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Year:  1999        PMID: 10449375     DOI: 10.1016/S0959-440X(99)80074-8

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  6 in total

1.  The use of mRNA display to select high-affinity protein-binding peptides.

Authors:  D S Wilson; A D Keefe; J W Szostak
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

2.  SELEX_DB: a database on in vitro selected oligomers adapted for recognizing natural sites and for analyzing both SNPs and site-directed mutagenesis data.

Authors:  Julia V Ponomarenko; Galina V Orlova; Anatoly S Frolov; Mikhail S Gelfand; Mikhail P Ponomarenko
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

3.  ASPD (Artificially Selected Proteins/Peptides Database): a database of proteins and peptides evolved in vitro.

Authors:  Vadim P Valuev; Dmitry A Afonnikov; Mikhail P Ponomarenko; Luciano Milanesi; Nikolay A Kolchanov
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

4.  Synthetic ligands discovered by in vitro selection.

Authors:  S Jarrett Wrenn; Rebecca M Weisinger; David R Halpin; Pehr B Harbury
Journal:  J Am Chem Soc       Date:  2007-10-06       Impact factor: 15.419

5.  Expressible molecular colonies.

Authors:  Timur R Samatov; Helena V Chetverina; Alexander B Chetverin
Journal:  Nucleic Acids Res       Date:  2005-10-04       Impact factor: 16.971

6.  DNA display II. Genetic manipulation of combinatorial chemistry libraries for small-molecule evolution.

Authors:  David R Halpin; Pehr B Harbury
Journal:  PLoS Biol       Date:  2004-06-22       Impact factor: 8.029

  6 in total

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