Literature DB >> 10438741

Regulation of gene expression by glucose in Saccharomyces cerevisiae: a role for ADA2 and ADA3/NGG1.

M Wu1, L Newcomb, W Heideman.   

Abstract

When Saccharomyces cerevisiae cells are transferred from poor medium to fresh medium containing glucose, they rapidly increase the transcription of a large group of genes as they resume rapid growth and accelerate progress through the cell cycle. Among those genes induced by glucose is CLN3, encoding a G(1) cyclin that is thought to play a pivotal role in progression through Start. Deletion of CLN3 delays the increase in proliferation normally observed in response to glucose medium. ADA2 and ADA3/NGG1 are necessary for the rapid induction of CLN3 message levels in response to glucose. Loss of either ADA2 or ADA3/NGG1 also affects a large number of genes and inhibits the rapid global increase in transcription that occurs in response to glucose. Surprisingly, these effects are transitory, and expression of CLN3 and total poly(A)(+) RNA appear normal when ADA2 or ADA3/NGG1 deletion mutants are examined in log-phase growth. These results indicate a role for ADA2 and ADA3/NGG1 in allowing rapid transcriptional responses to environmental signals. Consistent with the role of the Ada proteins in positive regulation of CLN3, deletion of RPD3, encoding a histone deacetylase, prevented the down regulation of CLN3 mRNA in the absence of glucose.

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Year:  1999        PMID: 10438741      PMCID: PMC93958     

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  35 in total

1.  Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex.

Authors:  P A Grant; L Duggan; J Côté; S M Roberts; J E Brownell; R Candau; R Ohba; T Owen-Hughes; C D Allis; F Winston; S L Berger; J L Workman
Journal:  Genes Dev       Date:  1997-07-01       Impact factor: 11.361

2.  Role for ADA/GCN5 products in antagonizing chromatin-mediated transcriptional repression.

Authors:  K J Pollard; C L Peterson
Journal:  Mol Cell Biol       Date:  1997-11       Impact factor: 4.272

Review 3.  The SAGA unfolds: convergence of transcription regulators in chromatin-modifying complexes.

Authors:  P A Grant; D E Sterner; L J Duggan; J L Workman; S L Berger
Journal:  Trends Cell Biol       Date:  1998-05       Impact factor: 20.808

Review 4.  Histone acetylation and transcriptional regulatory mechanisms.

Authors:  K Struhl
Journal:  Genes Dev       Date:  1998-03-01       Impact factor: 11.361

5.  Exploring the metabolic and genetic control of gene expression on a genomic scale.

Authors:  J L DeRisi; V R Iyer; P O Brown
Journal:  Science       Date:  1997-10-24       Impact factor: 47.728

6.  HDA1 and RPD3 are members of distinct yeast histone deacetylase complexes that regulate silencing and transcription.

Authors:  S E Rundlett; A A Carmen; R Kobayashi; S Bavykin; B M Turner; M Grunstein
Journal:  Proc Natl Acad Sci U S A       Date:  1996-12-10       Impact factor: 11.205

7.  Growth-independent regulation of CLN3 mRNA levels by nutrients in Saccharomyces cerevisiae.

Authors:  F Parviz; W Heideman
Journal:  J Bacteriol       Date:  1998-01       Impact factor: 3.490

8.  Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt, Ada, and Gcn5 proteins, with the Snf/Swi and Srb/mediator complexes.

Authors:  S M Roberts; F Winston
Journal:  Genetics       Date:  1997-10       Impact factor: 4.562

9.  Activation of CLN1 and CLN2 G1 cyclin gene expression by BCK2.

Authors:  C J Di Como; H Chang; K T Arndt
Journal:  Mol Cell Biol       Date:  1995-04       Impact factor: 4.272

10.  Regulation of the Cln3-Cdc28 kinase by cAMP in Saccharomyces cerevisiae.

Authors:  D D Hall; D D Markwardt; F Parviz; W Heideman
Journal:  EMBO J       Date:  1998-08-03       Impact factor: 11.598

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  13 in total

1.  The histone deacetylase genes HDA1 and RPD3 play distinct roles in regulation of high-frequency phenotypic switching in Candida albicans.

Authors:  T Srikantha; L Tsai; K Daniels; A J Klar; D R Soll
Journal:  J Bacteriol       Date:  2001-08       Impact factor: 3.490

2.  Genomewide studies of histone deacetylase function in yeast.

Authors:  B E Bernstein; J K Tong; S L Schreiber
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-05       Impact factor: 11.205

3.  Growth rate and cell size modulate the synthesis of, and requirement for, G1-phase cyclins at start.

Authors:  Brandt L Schneider; Jian Zhang; J Markwardt; George Tokiwa; Tom Volpe; Sangeet Honey; Bruce Futcher
Journal:  Mol Cell Biol       Date:  2004-12       Impact factor: 4.272

4.  The homologous Drosophila transcriptional adaptors ADA2a and ADA2b are both required for normal development but have different functions.

Authors:  Tibor Pankotai; Orbán Komonyi; László Bodai; Zsuzsanna Ujfaludi; Selen Muratoglu; Anita Ciurciu; László Tora; János Szabad; Imre Boros
Journal:  Mol Cell Biol       Date:  2005-09       Impact factor: 4.272

5.  Glucose regulation of Saccharomyces cerevisiae cell cycle genes.

Authors:  Laura L Newcomb; Jasper A Diderich; Matthew G Slattery; Warren Heideman
Journal:  Eukaryot Cell       Date:  2003-02

6.  Multiple pathways for suppression of mutants affecting G1-specific transcription in Saccharomyces cerevisiae.

Authors:  Karin Flick; Curt Wittenberg
Journal:  Genetics       Date:  2005-01       Impact factor: 4.562

7.  Acetyl-CoA induces transcription of the key G1 cyclin CLN3 to promote entry into the cell division cycle in Saccharomyces cerevisiae.

Authors:  Lei Shi; Benjamin P Tu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-15       Impact factor: 11.205

8.  The function and properties of the Azf1 transcriptional regulator change with growth conditions in Saccharomyces cerevisiae.

Authors:  Matthew G Slattery; Dritan Liko; Warren Heideman
Journal:  Eukaryot Cell       Date:  2006-02

Review 9.  Glucose signaling in Saccharomyces cerevisiae.

Authors:  George M Santangelo
Journal:  Microbiol Mol Biol Rev       Date:  2006-03       Impact factor: 11.056

10.  The loss of histone H3 lysine 9 acetylation due to dSAGA-specific dAda2b mutation influences the expression of only a small subset of genes.

Authors:  Nóra Zsindely; Tibor Pankotai; Zsuzsanna Ujfaludi; Dániel Lakatos; Orbán Komonyi; László Bodai; László Tora; Imre M Boros
Journal:  Nucleic Acids Res       Date:  2009-09-08       Impact factor: 16.971

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