Literature DB >> 10438618

Phosphatidylinositol phosphate kinase: a link between protein kinase and glutathione synthase folds.

N V Grishin1.   

Abstract

Comparisons of serine/threonine protein kinase (PK) and type IIbeta phosphatidylinositol phosphate kinase (PIPK) structures with each other and also with other proteins reveal structural and functional similarity between the two kinases and proteins of the glutathione synthase fold (ATP-grasp). This suggests that these enzymes are evolutionarily related. The structure of PIPK, which clearly resembles both PK and ATP-grasp, provides a link between the two proteins and establishes that the C-terminal domains of PK, PIPK and ATP-grasp share the same fold. The functional implications of the proposed homology are discussed.

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Year:  1999        PMID: 10438618     DOI: 10.1006/jmbi.1999.2973

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  21 in total

1.  Sialidase-like Asp-boxes: sequence-similar structures within different protein folds.

Authors:  R R Copley; R B Russell; C P Ponting
Journal:  Protein Sci       Date:  2001-02       Impact factor: 6.725

2.  The distribution of ligand-binding pockets around protein-protein interfaces suggests a general mechanism for pocket formation.

Authors:  Mu Gao; Jeffrey Skolnick
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-21       Impact factor: 11.205

3.  Mechanism of substrate specificity of phosphatidylinositol phosphate kinases.

Authors:  Yagmur Muftuoglu; Yi Xue; Xiang Gao; Dianqing Wu; Ya Ha
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-20       Impact factor: 11.205

4.  Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments.

Authors:  Lei Xie; Philip E Bourne
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-02       Impact factor: 11.205

Review 5.  Resilience of biochemical activity in protein domains in the face of structural divergence.

Authors:  Dapeng Zhang; Lakshminarayan M Iyer; A Maxwell Burroughs; L Aravind
Journal:  Curr Opin Struct Biol       Date:  2014-06-19       Impact factor: 6.809

6.  Asp1, a conserved 1/3 inositol polyphosphate kinase, regulates the dimorphic switch in Schizosaccharomyces pombe.

Authors:  Jennifer Pöhlmann; Ursula Fleig
Journal:  Mol Cell Biol       Date:  2010-07-12       Impact factor: 4.272

7.  β-Strand-mediated interactions of protein domains.

Authors:  Archana S Bhat; Lisa N Kinch; Nick V Grishin
Journal:  Proteins       Date:  2020-07-11

8.  Amidoligases with ATP-grasp, glutamine synthetase-like and acetyltransferase-like domains: synthesis of novel metabolites and peptide modifications of proteins.

Authors:  Lakshminarayan M Iyer; Saraswathi Abhiman; A Maxwell Burroughs; L Aravind
Journal:  Mol Biosyst       Date:  2009-10-13

Review 9.  Synthesis and function of membrane phosphoinositides in budding yeast, Saccharomyces cerevisiae.

Authors:  Thomas Strahl; Jeremy Thorner
Journal:  Biochim Biophys Acta       Date:  2007-02-06

Review 10.  Inositol pyrophosphates: structure, enzymology and function.

Authors:  Christopher John Barker; Christopher Illies; Gian Carlo Gaboardi; Per-Olof Berggren
Journal:  Cell Mol Life Sci       Date:  2009-08-28       Impact factor: 9.261

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