Literature DB >> 10436927

A phylogenetic analysis of microbial communities associated with methane hydrate containing marine fluids and sediments in the Cascadia margin (ODP site 892B).

K A Bidle1, M Kastner, D H Bartlett.   

Abstract

Methane hydrates represent an enormous carbon and energy source in many low temperature deep marine sediments. However, little information is available concerning the nature of the microbial communities associated with these structures. Here, we describe a phylogenetic analysis based on ribosomal DNA (rDNA) sequences obtained from sediment and fluid samples present in a region of gas hydrate formation in shallow sediments within the Cascadia margin in and around Ocean Drilling Program (ODP) Site 892B. Our studies detected diverse sulfur-utilizing microbes, methanogens, methanotrophs, and non-thermophilic members of the kingdom Crenarchaeota. This is the first culture-independent phylogenetic analysis of a gas hydrate habitat.

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Year:  1999        PMID: 10436927     DOI: 10.1111/j.1574-6968.1999.tb13719.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  23 in total

1.  Temporal changes in archaeal diversity and chemistry in a mid-ocean ridge subseafloor habitat.

Authors:  Julie A Huber; David A Butterfield; John A Baross
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

2.  Microbial communities associated with geological horizons in coastal subseafloor sediments from the sea of okhotsk.

Authors:  Fumio Inagaki; Masae Suzuki; Ken Takai; Hanako Oida; Tatsuhiko Sakamoto; Kaori Aoki; Kenneth H Nealson; Koki Horikoshi
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

3.  Phylogenetic composition of Arctic Ocean archaeal assemblages and comparison with Antarctic assemblages.

Authors:  Nasreen Bano; Shomari Ruffin; Briana Ransom; James T Hollibaugh
Journal:  Appl Environ Microbiol       Date:  2004-02       Impact factor: 4.792

4.  Analysis of methanogen diversity in a hypereutrophic lake using PCR-RFLP analysis of mcr sequences.

Authors:  J Earl; G Hall; R W Pickup; D A Ritchie; C Edwards
Journal:  Microb Ecol       Date:  2003-08       Impact factor: 4.552

5.  Phylogenetic characterization of methanogenic assemblages in eutrophic and oligotrophic areas of the Florida Everglades.

Authors:  Hector Castro; Andrew Ogram; K R Reddy
Journal:  Appl Environ Microbiol       Date:  2004-11       Impact factor: 4.792

6.  Metabolically active Crenarchaeota in Altamira Cave.

Authors:  Juan M Gonzalez; M Carmen Portillo; Cesareo Saiz-Jimenez
Journal:  Naturwissenschaften       Date:  2005-11-15

7.  Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin.

Authors:  Fumio Inagaki; Takuro Nunoura; Satoshi Nakagawa; Andreas Teske; Mark Lever; Antje Lauer; Masae Suzuki; Ken Takai; Mark Delwiche; Frederick S Colwell; Kenneth H Nealson; Koki Horikoshi; Steven D'Hondt; Bo B Jørgensen
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-13       Impact factor: 11.205

8.  Cultivation of methanogens from shallow marine sediments at Hydrate Ridge, Oregon.

Authors:  Melissa M Kendall; David R Boone
Journal:  Archaea       Date:  2006-08       Impact factor: 3.273

9.  Phylogenetic diversity of sulfate-reducing bacteria of sediments of Chilika Lake, India, determined through analysis of the dissimilatory sulfite reductase (dsr AB) gene.

Authors:  Sri Sasi Jyothsna Tadinada; Rahul Kamidi; Saikat Dutta; Sasikala Chintalapati; Venkata Ramana Chintalapati
Journal:  3 Biotech       Date:  2019-03-07       Impact factor: 2.406

10.  Archaeal community structure and pathway of methane formation on rice roots.

Authors:  K-J Chin; T Lueders; M W Friedrich; M Klose; R Conrad
Journal:  Microb Ecol       Date:  2004-01       Impact factor: 4.552

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