Literature DB >> 10430664

The functional intronless S-adenosylmethionine decarboxylase gene of the mouse (Amd-2) is linked to the ornithine decarboxylase gene (Odc) on chromosome 12 and is present in distantly related species of the genus Mus.

K Persson1, O Heby, F G Berger.   

Abstract

S-Adenosylmethionine decarboxylase (AdoMetDC) is a key enzyme in the biosynthesis of polyamines. We have previously identified a mouse AdoMetDC gene that exhibits the hallmarks of a retroposon; that is, it has no introns, is flanked by direct repeats, and has a poly(dA) tract at its 3'-end. This gene, termed Amd-2, is not a processed pseudogene; rather, it is transcribed in a variety of mouse tissues and encodes a functional enzyme. In the current report, we present the sequence of a 6.7-kb genomic segment of the Amd-2 locus. Several sequences of interest, including an intercisternal A particle (IAP) element, a transposon-related sequence, and several expressed sequence tags (ESTs), were found within or near Amd-2. We also show, through analysis of an interspecific backcross, that Amd-2 is located on Chr 12, tightly linked to the gene (Odc) that encodes ornithine decarboxylase, another key enzyme in polyamine synthesis. Finally, we show that Amd-2 is present among several divergent species of the genus Mus. Thus, the integration event that generated Amd-2 may have occurred early during Mus evolution.

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Year:  1999        PMID: 10430664     DOI: 10.1007/s003359901092

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  4 in total

1.  Sequence-based characterization of structural variation in the mouse genome.

Authors:  Binnaz Yalcin; Kim Wong; Avigail Agam; Martin Goodson; Thomas M Keane; Xiangchao Gan; Christoffer Nellåker; Leo Goodstadt; Jérôme Nicod; Amarjit Bhomra; Polinka Hernandez-Pliego; Helen Whitley; James Cleak; Rebekah Dutton; Deborah Janowitz; Richard Mott; David J Adams; Jonathan Flint
Journal:  Nature       Date:  2011-09-14       Impact factor: 49.962

Review 2.  Next-generation sequencing of experimental mouse strains.

Authors:  Binnaz Yalcin; David J Adams; Jonathan Flint; Thomas M Keane
Journal:  Mamm Genome       Date:  2012-07-07       Impact factor: 2.957

3.  A retrocopy of a gene can functionally displace the source gene in evolution.

Authors:  Aleksey N Krasnov; Maria M Kurshakova; Vasily E Ramensky; Pavel V Mardanov; Elena N Nabirochkina; Sofia G Georgieva
Journal:  Nucleic Acids Res       Date:  2005-11-27       Impact factor: 16.971

Review 4.  Identification of structural variation in mouse genomes.

Authors:  Thomas M Keane; Kim Wong; David J Adams; Jonathan Flint; Alexandre Reymond; Binnaz Yalcin
Journal:  Front Genet       Date:  2014-07-02       Impact factor: 4.599

  4 in total

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