Literature DB >> 10423446

Femtosecond spectroscopic observations of initial intermediates in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila.

S Devanathan1, A Pacheco, L Ujj, M Cusanovich, G Tollin, S Lin, N Woodbury.   

Abstract

Femtosecond time-resolved absorbance measurements were used to probe the subpicosecond primary events of the photoactive yellow protein (PYP), a 14-kD soluble photoreceptor from Ectothiorhodospira halophila. Previous picosecond absorption studies from our laboratory have revealed the presence of two new early photochemical intermediates in the PYP photocycle, I(0), which appears in </=3 ps, and I(0)(double dagger), which is formed in 220 ps, as well as stimulated emission from the PYP excited state. In the present study, kinetic measurements at two excitation wavelengths (395 nm and 460 nm) on either side of the PYP absorption maximum (446 nm) were undertaken using 100-fs pump and probe pulses. Global analysis over a range of probe wavelengths yielded time constants of 1.9 ps for the photochemical formation of the I(0) intermediate via the PYP excited state, and 3.4 ps for the repopulation of the ground state from the excited state. In addition to these pathways, 395 nm excitation also initiated an alternative route for PYP excitation and photochemistry, presumably involving a different excited electronic state of the chromophore. No photochemical intermediates formed before I(0) were observed. Based on these data, a quantum yield of 0.5-0.6 for I(0) formation was determined. The structural and mechanistic aspects of these results are discussed.

Entities:  

Mesh:

Substances:

Year:  1999        PMID: 10423446      PMCID: PMC1300392          DOI: 10.1016/S0006-3495(99)76952-3

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  16 in total

Review 1.  Photointermediates of visual pigments.

Authors:  J W Lewis; D S Kliger
Journal:  J Bioenerg Biomembr       Date:  1992-04       Impact factor: 2.945

2.  Picosecond decay kinetics and quantum yield of fluorescence of the photoactive yellow protein from the halophilic purple phototrophic bacterium, Ectothiorhodospira halophila.

Authors:  T E Meyer; G Tollin; T P Causgrove; P Cheng; R E Blankenship
Journal:  Biophys J       Date:  1991-05       Impact factor: 4.033

3.  New photocycle intermediates in the photoactive yellow protein from Ectothiorhodospira halophila: picosecond transient absorption spectroscopy.

Authors:  L Ujj; S Devanathan; T E Meyer; M A Cusanovich; G Tollin; G H Atkinson
Journal:  Biophys J       Date:  1998-07       Impact factor: 4.033

4.  Structure at 0.85 A resolution of an early protein photocycle intermediate.

Authors:  U K Genick; S M Soltis; P Kuhn; I L Canestrelli; E D Getzoff
Journal:  Nature       Date:  1998-03-12       Impact factor: 49.962

5.  Active site mutants implicate key residues for control of color and light cycle kinetics of photoactive yellow protein.

Authors:  U K Genick; S Devanathan; T E Meyer; I L Canestrelli; E Williams; M A Cusanovich; G Tollin; E D Getzoff
Journal:  Biochemistry       Date:  1997-01-07       Impact factor: 3.162

6.  Vibrationally coherent photochemistry in the femtosecond primary event of vision.

Authors:  Q Wang; R W Schoenlein; L A Peteanu; R A Mathies; C V Shank
Journal:  Science       Date:  1994-10-21       Impact factor: 47.728

7.  The eubacterium Ectothiorhodospira halophila is negatively phototactic, with a wavelength dependence that fits the absorption spectrum of the photoactive yellow protein.

Authors:  W W Sprenger; W D Hoff; J P Armitage; K J Hellingwerf
Journal:  J Bacteriol       Date:  1993-05       Impact factor: 3.490

8.  Properties of a water-soluble, yellow protein isolated from a halophilic phototrophic bacterium that has photochemical activity analogous to sensory rhodopsin.

Authors:  T E Meyer; E Yakali; M A Cusanovich; G Tollin
Journal:  Biochemistry       Date:  1987-01-27       Impact factor: 3.162

9.  Complete chemical structure of photoactive yellow protein: novel thioester-linked 4-hydroxycinnamyl chromophore and photocycle chemistry.

Authors:  M Baca; G E Borgstahl; M Boissinot; P M Burke; D R Williams; K A Slater; E D Getzoff
Journal:  Biochemistry       Date:  1994-12-06       Impact factor: 3.162

10.  Photoactive yellow protein from the purple phototrophic bacterium, Ectothiorhodospira halophila. Quantum yield of photobleaching and effects of temperature, alcohols, glycerol, and sucrose on kinetics of photobleaching and recovery.

Authors:  T E Meyer; G Tollin; J H Hazzard; M A Cusanovich
Journal:  Biophys J       Date:  1989-09       Impact factor: 4.033

View more
  18 in total

1.  On the absorbance changes in the photocycle of the photoactive yellow protein: a quantum-chemical analysis.

Authors:  V Molina; M Merchán
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-03       Impact factor: 11.205

2.  Early intermediates in the photocycle of the Glu46Gln mutant of photoactive yellow protein: femtosecond spectroscopy.

Authors:  S Devanathan; S Lin; M A Cusanovich; N Woodbury; G Tollin
Journal:  Biophys J       Date:  2000-10       Impact factor: 4.033

3.  Structural change of site-directed mutants of PYP: new dynamics during pR state.

Authors:  Kan Takeshita; Yasushi Imamoto; Mikio Kataoka; Ken'ichi Mihara; Fumio Tokunaga; Masahide Terazima
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

4.  Contrasting the excited-state dynamics of the photoactive yellow protein chromophore: protein versus solvent environments.

Authors:  Mikas Vengris; Michael A van der Horst; Goran Zgrablic; Ivo H M van Stokkum; Stefan Haacke; Majed Chergui; Klaas J Hellingwerf; Rienk van Grondelle; Delmar S Larsen
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

5.  Incoherent manipulation of the photoactive yellow protein photocycle with dispersed pump-dump-probe spectroscopy.

Authors:  Delmar S Larsen; Ivo H M van Stokkum; Mikas Vengris; Michael A van Der Horst; Frank L de Weerd; Klaas J Hellingwerf; Rienk van Grondelle
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

6.  Primary steps of the photoactive yellow protein: isolated chromophore dynamics and protein directed function.

Authors:  I-Ren Lee; Wonchul Lee; Ahmed H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-03       Impact factor: 11.205

7.  Structural evolution of the chromophore in the primary stages of trans/cis isomerization in photoactive yellow protein.

Authors:  Karsten Heyne; Omar F Mohammed; Anwar Usman; Jens Dreyer; Erik T J Nibbering; Michael A Cusanovich
Journal:  J Am Chem Soc       Date:  2005-12-28       Impact factor: 15.419

8.  On the Configurational and Conformational Changes in Photoactive Yellow Protein that Leads to Signal Generation in Ectothiorhodospira halophila.

Authors:  K J Hellingwerf; J Hendriks; Th Gensch
Journal:  J Biol Phys       Date:  2002-09       Impact factor: 1.365

9.  Ultrafast infrared spectroscopy reveals a key step for successful entry into the photocycle for photoactive yellow protein.

Authors:  L J G W van Wilderen; M A van der Horst; I H M van Stokkum; K J Hellingwerf; R van Grondelle; M L Groot
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-02       Impact factor: 11.205

10.  Visualization of H atoms in the X-ray crystal structure of photoactive yellow protein: Does it contain low-barrier hydrogen bonds?

Authors:  Jimin Wang
Journal:  Protein Sci       Date:  2019-08-31       Impact factor: 6.725

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.