Literature DB >> 10413616

Folyt1, a new member of the hAT family, is active in the genome of the plant pathogen Fusarium oxysporum.

E Gómez-Gómez1, N Anaya, M I Roncero, C Hera.   

Abstract

An active transposable element, Folyt1, has been isolated from the tomato pathogen Fusarium oxysporum f. sp. lycopersici as an insertion sequence within the coding region of the nitrate reductase gene (nit 1) in two independent mutants (CO66 and CO108). Folyt1 was 2615 bp in length and contained 9-bp imperfect inverted terminal repeats (ITRs) and 8 bp duplicated at the target site upon insertion. The element contained a long open reading frame interrupted by a single putative intron. The predicted amino acid sequence showed similarity to conserved domains of transposases from hobo, Ac, and Tam3 elements, which belong to the hAT family. The excision frequency of Folyt1 was determined to be less than 10(-5) in both mutants. These events restored the nit 1 wild-type allele without leaving footprints in all the revertants of strain CO66. Nevertheless, some revertants of strain CO108 showed a point mutation footprint at the target sequence. Expression of the Folyt1 transposase was detected by Northern analysis as a 2.1-kb transcript. The element exists in about 10 copies per genome in F. oxysporum f. sp. lycopersici and appears to be widely distributed among different formae speciales of F. oxysporum. Copyright 1999 Academic Press.

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Year:  1999        PMID: 10413616     DOI: 10.1006/fgbi.1999.1132

Source DB:  PubMed          Journal:  Fungal Genet Biol        ISSN: 1087-1845            Impact factor:   3.495


  6 in total

1.  The hAT -like DNA transposon DodoPi resides in a cluster of retro- and DNA transposons in the stramenopile Phytophthora infestans.

Authors:  A M V Ah Fong; H S Judelson
Journal:  Mol Genet Genomics       Date:  2004-04-20       Impact factor: 3.291

2.  Scooter, a new active transposon in Schizophyllum commune, has disrupted two genes regulating signal transduction.

Authors:  T J Fowler; M F Mitton
Journal:  Genetics       Date:  2000-12       Impact factor: 4.562

3.  MpSaci is a widespread gypsy-Ty3 retrotransposon highly represented by non-autonomous copies in the Moniliophthora perniciosa genome.

Authors:  Jorge F Pereira; Elza F Araújo; Sérgio H Brommonschenkel; Casley B Queiroz; Gustavo G L Costa; Marcelo F Carazzolle; Gonçalo A G Pereira; Marisa V Queiroz
Journal:  Curr Genet       Date:  2015-01-23       Impact factor: 3.886

4.  Heterologous transposition in Ustilago maydis.

Authors:  O Ladendorf; A Brachmann; J Kämper
Journal:  Mol Genet Genomics       Date:  2003-05-07       Impact factor: 3.291

5.  MITEs in the promoters of effector genes allow prediction of novel virulence genes in Fusarium oxysporum.

Authors:  Sarah M Schmidt; Petra M Houterman; Ines Schreiver; Lisong Ma; Stefan Amyotte; Biju Chellappan; Sjef Boeren; Frank L W Takken; Martijn Rep
Journal:  BMC Genomics       Date:  2013-02-22       Impact factor: 3.969

6.  Comparative genomics and prediction of conditionally dispensable sequences in legume-infecting Fusarium oxysporum formae speciales facilitates identification of candidate effectors.

Authors:  Angela H Williams; Mamta Sharma; Louise F Thatcher; Sarwar Azam; James K Hane; Jana Sperschneider; Brendan N Kidd; Jonathan P Anderson; Raju Ghosh; Gagan Garg; Judith Lichtenzveig; H Corby Kistler; Terrance Shea; Sarah Young; Sally-Anne G Buck; Lars G Kamphuis; Rachit Saxena; Suresh Pande; Li-Jun Ma; Rajeev K Varshney; Karam B Singh
Journal:  BMC Genomics       Date:  2016-03-05       Impact factor: 3.969

  6 in total

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