Literature DB >> 10406137

Computational rules for chemotaxis in the nematode C. elegans.

T C Ferrée1, S R Lockery.   

Abstract

We derive a linear neural network model of the chemotaxis control circuit in the nematode Caenorhabditis elegans and demonstrate that this model is capable of producing nematodelike chemotaxis. By expanding the analytic solution for the network output in time-derivatives of the network input, we extract simple computational rules that reveal how the model network controls chemotaxis. Based on these rules we find that optimized linear networks typically control chemotaxis by computing the first time-derivative of the chemical concentration and modulating the body turning rate in response to this derivative. We argue that this is consistent with behavioral studies and a plausible mechanism for at least one component of chemotaxis in real nematodes.

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Year:  1999        PMID: 10406137     DOI: 10.1023/a:1008857906763

Source DB:  PubMed          Journal:  J Comput Neurosci        ISSN: 0929-5313            Impact factor:   1.621


  16 in total

1.  The structure of the nervous system of the nematode Caenorhabditis elegans.

Authors:  J G White; E Southgate; J N Thomson; S Brenner
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1986-11-12       Impact factor: 6.237

2.  Normal and mutant thermotaxis in the nematode Caenorhabditis elegans.

Authors:  E M Hedgecock; R L Russell
Journal:  Proc Natl Acad Sci U S A       Date:  1975-10       Impact factor: 11.205

3.  Chemosensory neurons with overlapping functions direct chemotaxis to multiple chemicals in C. elegans.

Authors:  C I Bargmann; H R Horvitz
Journal:  Neuron       Date:  1991-11       Impact factor: 17.173

4.  Theory of the locomotion of nematodes: Dynamics of undulatory progression on a surface.

Authors:  E Niebur; P Erdös
Journal:  Biophys J       Date:  1991-11       Impact factor: 4.033

5.  A dynamic network simulation of the nematode tap withdrawal circuit: predictions concerning synaptic function using behavioral criteria.

Authors:  S R Wicks; C J Roehrig; C H Rankin
Journal:  J Neurosci       Date:  1996-06-15       Impact factor: 6.167

6.  Specific neuroanatomical changes in chemosensory mutants of the nematode Caenorhabditis elegans.

Authors:  J A Lewis; J A Hodgkin
Journal:  J Comp Neurol       Date:  1977-04-01       Impact factor: 3.215

7.  Mutants with altered muscle structure of Caenorhabditis elegans.

Authors:  R H Waterston; J N Thomson; S Brenner
Journal:  Dev Biol       Date:  1980-06-15       Impact factor: 3.582

8.  Products of the unc-52 gene in Caenorhabditis elegans are homologous to the core protein of the mammalian basement membrane heparan sulfate proteoglycan.

Authors:  T M Rogalski; B D Williams; G P Mullen; D G Moerman
Journal:  Genes Dev       Date:  1993-08       Impact factor: 11.361

9.  Theory of the locomotion of nematodes: control of the somatic motor neurons by interneurons.

Authors:  E Niebur; P Erdös
Journal:  Math Biosci       Date:  1993-11       Impact factor: 2.144

10.  Wave Forms of Caenorhabditis elegans in a Chemical Attractant and Repellent and in Thermal Gradients.

Authors:  T A Rutherford; N A Croll
Journal:  J Nematol       Date:  1979-07       Impact factor: 1.402

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  23 in total

1.  Understanding complex behaviors by analyzing optimized models: C. elegans gradient navigation.

Authors:  Serge Thill; Tim C Pearce
Journal:  HFSP J       Date:  2007-10-15

2.  The role of multiple chemotactic mechanisms in a model of chemotaxis in C. elegans: different mechanisms are specialised for different environments.

Authors:  Peter A Appleby
Journal:  J Comput Neurosci       Date:  2013-08-14       Impact factor: 1.621

3.  A plausible neural circuit for decision making and its formation based on reinforcement learning.

Authors:  Hui Wei; Dawei Dai; Yijie Bu
Journal:  Cogn Neurodyn       Date:  2017-02-18       Impact factor: 5.082

4.  Biological modeling of complex chemotaxis behaviors for C. elegans under speed regulation--a dynamic neural networks approach.

Authors:  Jian-Xin Xu; Xin Deng
Journal:  J Comput Neurosci       Date:  2013-01-19       Impact factor: 1.621

5.  Modeling the thermotaxis behavior of C.elegans based on the artificial neural network.

Authors:  Mingxu Li; Xin Deng; Jin Wang; Qiaosong Chen; Yun Tang
Journal:  Bioengineered       Date:  2016-07-03       Impact factor: 3.269

6.  The fundamental role of pirouettes in Caenorhabditis elegans chemotaxis.

Authors:  J T Pierce-Shimomura; T M Morse; S R Lockery
Journal:  J Neurosci       Date:  1999-11-01       Impact factor: 6.167

7.  Evolution and analysis of minimal neural circuits for klinotaxis in Caenorhabditis elegans.

Authors:  Eduardo J Izquierdo; Shawn R Lockery
Journal:  J Neurosci       Date:  2010-09-29       Impact factor: 6.167

Review 8.  Cracking neural circuits in a tiny brain: new approaches for understanding the neural circuitry of Drosophila.

Authors:  Shawn R Olsen; Rachel I Wilson
Journal:  Trends Neurosci       Date:  2008-09-03       Impact factor: 13.837

9.  Dynamical consequences of sensory feedback in a half-center oscillator coupled to a simple motor system.

Authors:  Zhuojun Yu; Peter J Thomas
Journal:  Biol Cybern       Date:  2021-03-03       Impact factor: 2.086

10.  Connecting a connectome to behavior: an ensemble of neuroanatomical models of C. elegans klinotaxis.

Authors:  Eduardo J Izquierdo; Randall D Beer
Journal:  PLoS Comput Biol       Date:  2013-02-07       Impact factor: 4.475

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