Literature DB >> 10394632

Expressed sequence tags (ESTs) from desiccated Tortula ruralis identify a large number of novel plant genes.

A J Wood1, R J Duff, M J Oliver.   

Abstract

The desiccation-tolerant moss Tortula ruralis [Hedw.] Gaerten., Meyer & Scherb. has both a constitutive protection system and an active rehydration induced recovery mechanism apparently unique to bryophytes. Immediately following rehydration, desiccated T.ruralis gametophytes produce a set of polypeptides whose synthesis is unique to the rehydrated state. We report the construction of a cDNA expression library from the polysomal mRNA of desiccated gametophytes and the single-pass sequencing of randomly selected clones. 152 expressed sequence tags (ESTs) were generated representing more than 60,000 bp of non-redundant DNA sequence. 44 ESTs (29%) demonstrated significant homology to previously identified nucleotide and/or polypeptide sequences, such as ribosomal proteins, desiccation-related peptides, early light-inducible proteins and a V-type ATPase. Analysis of a subset of these homologous ESTs reveals that codon preference in T.ruralis is similar to that of vascular plants, particularly the Magnoliopsida. 108 ESTs (71%) demonstrated no significant homology to deposited sequences and represent a large number of novel plant genes. Analysis of these ESTs will define the range of genes involved in cellular repair and recovery and may provide greater insight to the complex phenotype of vegetative desiccation-tolerance.

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Year:  1999        PMID: 10394632     DOI: 10.1093/oxfordjournals.pcp.a029551

Source DB:  PubMed          Journal:  Plant Cell Physiol        ISSN: 0032-0781            Impact factor:   4.927


  10 in total

Review 1.  Chromosome regions and stress-related sequences involved in resistance to abiotic stress in Triticeae.

Authors:  Luigi Cattivell; Paolo Baldi; Cristina Crosatti; Natale Di Fonzo; Primetta Faccioli; Maria Grossi; Anna M Mastrangelo; Nicola Pecchioni; A Michele Stanca
Journal:  Plant Mol Biol       Date:  2002 Mar-Apr       Impact factor: 4.076

Review 2.  Poikilohydry and homoihydry: antithesis or spectrum of possibilities?

Authors:  Michael C F Proctor; Zoltán Tuba
Journal:  New Phytol       Date:  2002-12       Impact factor: 10.151

3.  Hormonal regulation in green plant lineage families.

Authors:  M M Johri
Journal:  Physiol Mol Biol Plants       Date:  2008-06-15

4.  De novo transcriptome characterization and gene expression profiling of the desiccation tolerant moss Bryum argenteum following rehydration.

Authors:  Bei Gao; Daoyuan Zhang; Xiaoshuang Li; Honglan Yang; Yuanming Zhang; Andrew J Wood
Journal:  BMC Genomics       Date:  2015-05-28       Impact factor: 3.969

5.  Characterization of reference genes for RT-qPCR in the desert moss Syntrichia caninervis in response to abiotic stress and desiccation/rehydration.

Authors:  Xiaoshuang Li; Daoyuan Zhang; Haiyan Li; Bei Gao; Honglan Yang; Yuanming Zhang; Andrew J Wood
Journal:  Front Plant Sci       Date:  2015-02-05       Impact factor: 5.753

6.  Desiccation tolerance in bryophytes: The dehydration and rehydration transcriptomes in the desiccation-tolerant bryophyte Bryum argenteum.

Authors:  Bei Gao; Xiaoshuang Li; Daoyuan Zhang; Yuqing Liang; Honglan Yang; Moxian Chen; Yuanming Zhang; Jianhua Zhang; Andrew J Wood
Journal:  Sci Rep       Date:  2017-08-08       Impact factor: 4.379

7.  Evidence for the absence of enzymatic reactions in the glassy state. A case study of xanthophyll cycle pigments in the desiccation-tolerant moss Syntrichia ruralis.

Authors:  Beatriz Fernández-Marín; Ilse Kranner; María San Sebastián; Unai Artetxe; José Manuel Laza; José Luis Vilas; Hugh W Pritchard; Jayanthi Nadajaran; Fátima Míguez; José María Becerril; José Ignacio García-Plazaola
Journal:  J Exp Bot       Date:  2013-06-12       Impact factor: 6.992

8.  Characterization of an 18,166 EST dataset for cassava (Manihot esculenta Crantz) enriched for drought-responsive genes.

Authors:  Y Lokko; J V Anderson; S Rudd; A Raji; D Horvath; M A Mikel; R Kim; L Liu; A Hernandez; A G O Dixon; I L Ingelbrecht
Journal:  Plant Cell Rep       Date:  2007-05-31       Impact factor: 4.964

9.  The rehydration transcriptome of the desiccation-tolerant bryophyte Tortula ruralis: transcript classification and analysis.

Authors:  Melvin J Oliver; Scot E Dowd; Joaquin Zaragoza; Steven A Mauget; Paxton R Payton
Journal:  BMC Genomics       Date:  2004-11-16       Impact factor: 3.969

10.  De novo assembly and characterization of the transcriptome in the desiccation-tolerant moss Syntrichia caninervis.

Authors:  Bei Gao; Daoyuan Zhang; Xiaoshuang Li; Honglan Yang; Andrew J Wood
Journal:  BMC Res Notes       Date:  2014-08-03
  10 in total

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