Literature DB >> 10393291

Specific lipid-protein interactions in a novel honeycomb lattice structure of bacteriorhodopsin.

H Sato1, K Takeda, K Tani, T Hino, T Okada, M Nakasako, N Kamiya, T Kouyama.   

Abstract

In the purple membrane of Halobacterium salinarium, bacteriorhodopsin trimers are arranged in a hexagonal lattice. When purple membrane sheets are incubated at high temperature with neutral detergent, membrane vesicularization takes place, yielding inside-out vesicles with a diameter of 50 nm. The vesicular structure becomes unstable at low temperature, where successive fusion of the vesicles yields a crystal which is composed of stacked planar membranes. X-ray crystallographic analysis reveals that the bacteriorhodopsin trimers are arranged in a honeycomb lattice in each membrane layer and that neighbouring membranes orient in opposite directions. The native structure of the trimeric unit is preserved in the honeycomb lattice, irrespective of alterations in the in-plane orientation of the trimer. One phospholipid tightly bound to a crevice between monomers in the trimeric unit is suggested to act as a glue in the formation of the trimer.

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Year:  1999        PMID: 10393291     DOI: 10.1107/s090744499900503x

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  11 in total

1.  The structures of the active center in dark-adapted bacteriorhodopsin by solution-state NMR spectroscopy.

Authors:  Heiko Patzelt; Bernd Simon; Antonius terLaak; Brigitte Kessler; Ronald Kühne; Peter Schmieder; Dieter Oesterhelt; Hartmut Oschkinat
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-15       Impact factor: 11.205

2.  Uniformity, ideality, and hydrogen bonds in transmembrane alpha-helices.

Authors:  Sanguk Kim; Timothy A Cross
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

3.  Diversity, Mechanism, and Optogenetic Application of Light-Driven Ion Pump Rhodopsins.

Authors:  Keiichi Inoue
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

4.  Differential stiffness and lipid mobility in the leaflets of purple membranes.

Authors:  Kislon Voïtchovsky; Sonia Antoranz Contera; Miya Kamihira; Anthony Watts; J F Ryan
Journal:  Biophys J       Date:  2005-12-30       Impact factor: 4.033

5.  Local and distant protein structural changes on photoisomerization of the retinal in bacteriorhodopsin.

Authors:  H Kandori; N Kinoshita; Y Yamazaki; A Maeda; Y Shichida; R Needleman; J K Lanyi; M Bizounok; J Herzfeld; J Raap; J Lugtenburg
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-25       Impact factor: 11.205

6.  Tight Asp-85--Thr-89 association during the pump switch of bacteriorhodopsin.

Authors:  H Kandori; Y Yamazaki; Y Shichida; J Raap; J Lugtenburg; M Belenky; J Herzfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

7.  Archaeal Lipids Regulating the Trimeric Structure Dynamics of Bacteriorhodopsin for Efficient Proton Release and Uptake.

Authors:  Sijin Chen; Xiaoyan Ding; Chao Sun; Fei Wang; Xiao He; Anthony Watts; Xin Zhao
Journal:  Int J Mol Sci       Date:  2022-06-21       Impact factor: 6.208

8.  Crystal structure of Cruxrhodopsin-3 from Haloarcula vallismortis.

Authors:  Siu Kit Chan; Tomomi Kitajima-Ihara; Ryudoh Fujii; Toshiaki Gotoh; Midori Murakami; Kunio Ihara; Tsutomu Kouyama
Journal:  PLoS One       Date:  2014-09-30       Impact factor: 3.240

9.  Chimeric proton-pumping rhodopsins containing the cytoplasmic loop of bovine rhodopsin.

Authors:  Kengo Sasaki; Takahiro Yamashita; Kazuho Yoshida; Keiichi Inoue; Yoshinori Shichida; Hideki Kandori
Journal:  PLoS One       Date:  2014-03-12       Impact factor: 3.240

10.  Structure of archaerhodopsin-2 at 1.8 Å resolution.

Authors:  Tsutomu Kouyama; Ryudo Fujii; Soun Kanada; Taichi Nakanishi; Siu Kit Chan; Midori Murakami
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2014-09-27
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