Literature DB >> 10386873

The molecular structure of an unusual cytochrome c2 determined at 2.0 A; the cytochrome cH from Methylobacterium extorquens.

J Read1, R Gill, S L Dales, J B Cooper, S P Wood, C Anthony.   

Abstract

Cytochrome cH is the electron donor to the oxidase in methylotrophic bacteria. Its amino acid sequence suggests that it is a typical Class 1 cytochrome c, but some features of the sequence indicated that its structure might be of special interest. The structure of oxidized cytochrome cH has been solved to 2.0 A resolution by X-ray diffraction. It has the classical tertiary structure of the Class 1 cytochromes c but bears a closer gross resemblance to mitochondrial cytochrome c than to the bacterial cytochrome c2. The left-hand side of the haem cleft is unique; in particular, it is highly hydrophobic, the usual water is absent, and the "conserved" Tyr67 is replaced by tryptophan. A number of features of the structure demonstrate that the usual hydrogen bonding network involving water in the haem channel is not essential and that other mechanisms may exist for modulation of redox potentials in this cytochrome.

Entities:  

Mesh:

Substances:

Year:  1999        PMID: 10386873      PMCID: PMC2144355          DOI: 10.1110/ps.8.6.1232

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  26 in total

1.  High-resolution refinement of yeast iso-1-cytochrome c and comparisons with other eukaryotic cytochromes c.

Authors:  G V Louie; G D Brayer
Journal:  J Mol Biol       Date:  1990-07-20       Impact factor: 5.469

2.  Structural significance of an internal water molecule studied by site-directed mutagenesis of tyrosine-67 in rat cytochrome c.

Authors:  T L Luntz; A Schejter; E A Garber; E Margoliash
Journal:  Proc Natl Acad Sci U S A       Date:  1989-05       Impact factor: 11.205

3.  Semisynthesis of cytochrome c analogues. The effect of modifying the conserved residues 38 and 39.

Authors:  A E Proudfoot; C J Wallace
Journal:  Biochem J       Date:  1987-12-15       Impact factor: 3.857

4.  Aromatic rings act as hydrogen bond acceptors.

Authors:  M Levitt; M F Perutz
Journal:  J Mol Biol       Date:  1988-06-20       Impact factor: 5.469

5.  The structure of oxidized cytochrome c 2 of Rhodospirillum rubrum.

Authors:  F R Salemme; S T Freer; N H Xuong; R A Alden; J Kraut
Journal:  J Biol Chem       Date:  1973-06-10       Impact factor: 5.157

6.  Effects of nonpolar environments on the redox potentials of heme complexes.

Authors:  R J Kassner
Journal:  Proc Natl Acad Sci U S A       Date:  1972-08       Impact factor: 11.205

7.  Conformation change of cytochrome c. I. Ferrocytochrome c structure refined at 1.5 A resolution.

Authors:  T Takano; R E Dickerson
Journal:  J Mol Biol       Date:  1981-11-25       Impact factor: 5.469

8.  Conformation change of cytochrome c. II. Ferricytochrome c refinement at 1.8 A and comparison with the ferrocytochrome structure.

Authors:  T Takano; R E Dickerson
Journal:  J Mol Biol       Date:  1981-11-25       Impact factor: 5.469

9.  Substitutions engineered by chemical synthesis at three conserved sites in mitochondrial cytochrome c. Thermodynamic and functional consequences.

Authors:  C J Wallace; P Mascagni; B T Chait; J F Collawn; Y Paterson; A E Proudfoot; S B Kent
Journal:  J Biol Chem       Date:  1989-09-15       Impact factor: 5.157

10.  High-resolution three-dimensional structure of horse heart cytochrome c.

Authors:  G W Bushnell; G V Louie; G D Brayer
Journal:  J Mol Biol       Date:  1990-07-20       Impact factor: 5.469

View more
  5 in total

1.  Crystallization and preliminary X-ray crystallographic analysis of MxaJ, a component of the methanol-oxidizing system operon from the marine bacterium Methylophaga aminisulfidivorans MPT.

Authors:  Jin Myung Choi; Jung Hun Kang; Dong Woo Lee; Si Wouk Kim; Sung Haeng Lee
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-07-27

Review 2.  Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.

Authors:  Jing Liu; Saumen Chakraborty; Parisa Hosseinzadeh; Yang Yu; Shiliang Tian; Igor Petrik; Ambika Bhagi; Yi Lu
Journal:  Chem Rev       Date:  2014-04-23       Impact factor: 60.622

3.  Cleavage of the iron-methionine bond in c-type cytochromes: crystal structure of oxidized and reduced cytochrome c(2) from Rhodopseudomonas palustris and its ammonia complex.

Authors:  Silvano Geremia; Gianpiero Garau; Lisa Vaccari; Riccardo Sgarra; Maria Silvia Viezzoli; Mario Calligaris; Lucio Randaccio
Journal:  Protein Sci       Date:  2002-01       Impact factor: 6.725

4.  Purification, crystallization and preliminary X-ray crystallographic analysis of a methanol dehydrogenase from the marine bacterium Methylophaga aminisulfidivorans MP(T).

Authors:  Jin Myung Choi; Hee Gon Kim; Jeong Sun Kim; Hyung Seop Youn; Soo Hyun Eom; Sung Lim Yu; Si Wouk Kim; Sung Haeng Lee
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-03-30

5.  Oxygen Generation via Water Splitting by a Novel Biogenic Metal Ion-Binding Compound.

Authors:  Philip Dershwitz; Nathan L Bandow; Junwon Yang; Jeremy D Semrau; Marcus T McEllistrem; Rafael A Heinze; Matheus Fonseca; Joshua C Ledesma; Jacob R Jennett; Ana M DiSpirito; Navjot S Athwal; Mark S Hargrove; Thomas A Bobik; Hans Zischka; Alan A DiSpirito
Journal:  Appl Environ Microbiol       Date:  2021-06-25       Impact factor: 4.792

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.