Literature DB >> 10383864

Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification products.

T L Marsh1.   

Abstract

Terminal restriction fragment length polymorphism is a recent molecular approach that can assess subtle genetic differences between strains as well as provide insight into the structure and function of microbial communities. The technique has both high sensitivity and throughput making it ideal for comparative analyses.

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Year:  1999        PMID： 10383864     DOI： 10.1016/S1369-5274(99)80056-3

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN： 1369-5274            Impact factor:   7.934


  67 in total

1.  Phylogenetic specificity and reproducibility and new method for analysis of terminal restriction fragment profiles of 16S rRNA genes from bacterial communities.

Authors:  J Dunbar; L O Ticknor; C R Kuske
Journal:  Appl Environ Microbiol       Date:  2001-01       Impact factor: 4.792

2.  Terminal restriction fragment length polymorphism monitoring of genes amplified directly from bacterial communities in soils and sediments.

Authors:  K D Bruce; M R Hughes
Journal:  Mol Biotechnol       Date:  2000-11       Impact factor: 2.695

3.  Terminal restriction fragment length polymorphism analysis program, a web-based research tool for microbial community analysis.

Authors:  T L Marsh; P Saxman; J Cole; J Tiedje
Journal:  Appl Environ Microbiol       Date:  2000-08       Impact factor: 4.792

4.  Comparison of soil bacterial communities in rhizospheres of three plant species and the interspaces in an arid grassland.

Authors:  Cheryl R Kuske; Lawrence O Ticknor; Mark E Miller; John M Dunbar; Jody A Davis; Susan M Barns; Jayne Belnap
Journal:  Appl Environ Microbiol       Date:  2002-04       Impact factor: 4.792

5.  Application of denaturing gradient gel electrophoresis (DGGE) to study the diversity of marine picoeukaryotic assemblages and comparison of DGGE with other molecular techniques.

Authors:  B Díez; C Pedrós-Alió; T L Marsh; R Massana
Journal:  Appl Environ Microbiol       Date:  2001-07       Impact factor: 4.792

6.  Web-based phylogenetic assignment tool for analysis of terminal restriction fragment length polymorphism profiles of microbial communities.

Authors:  Angela D Kent; Dan J Smith; Barbara J Benson; Eric W Triplett
Journal:  Appl Environ Microbiol       Date:  2003-11       Impact factor: 4.792

7.  Long-term succession of structure and diversity of a biofilm formed in a model drinking water distribution system.

Authors:  Adam C Martiny; Thomas M Jørgensen; Hans-Jørgen Albrechtsen; Erik Arvin; Søren Molin
Journal:  Appl Environ Microbiol       Date:  2003-11       Impact factor: 4.792

8.  Axial dynamics, stability, and interspecies similarity of bacterial community structure in the highly compartmentalized gut of soil-feeding termites (Cubitermes spp.).

Authors:  Dirk Schmitt-Wagner; Michael W Friedrich; Bianca Wagner; Andreas Brune
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

Review 9.  Techniques used to characterize the gut microbiota: a guide for the clinician.

Authors:  Marianne H Fraher; Paul W O'Toole; Eamonn M M Quigley
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2012-03-27       Impact factor: 46.802

10.  Effect of environmental factors and influence of rumen and hindgut biogeography on bacterial communities in steers.

Authors:  Gustavo A Romero-Pérez; Kim H Ominski; Tim A McAllister; Denis O Krause
Journal:  Appl Environ Microbiol       Date:  2010-11-12       Impact factor: 4.792
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