Literature DB >> 10366663

JaDis: computing distances between nucleic acid sequences.

I Gonçalves1, M Robinson, G Perrière, D Mouchiroud.   

Abstract

SUMMARY: JaDis is a Java application for computing evolutionary distances between nucleic acid sequences and G+C base frequencies. It allows specific comparison of coding sequences, of non-coding sequences or of a non-coding sequence with coding sequences. AVAILABILITY: http://pbil.univ-lyon1.fr/software/jadis.html

Mesh：

Year:  1999        PMID： 10366663     DOI： 10.1093/bioinformatics/15.5.424

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  6 in total

1.  Nature and structure of human genes that generate retropseudogenes.

Authors:  I Gonçalves; L Duret; D Mouchiroud
Journal:  Genome Res       Date:  2000-05       Impact factor: 9.043

2.  Determinants of CpG islands: expression in early embryo and isochore structure.

Authors:  L Ponger; L Duret; D Mouchiroud
Journal:  Genome Res       Date:  2001-11       Impact factor: 9.043

3.  Evolutionary pathways of the tirant LTR retrotransposon in the Drosophila melanogaster subgroup of species.

Authors:  Marie Fablet; Sémi Souames; Christian Biémont; Cristina Vieira
Journal:  J Mol Evol       Date:  2007-03-27       Impact factor: 2.395

4.  A gradual process of recombination restriction in the evolutionary history of the sex chromosomes in dioecious plants.

Authors:  Michael Nicolas; Gabriel Marais; Vladka Hykelova; Bohuslav Janousek; Valérie Laporte; Boris Vyskot; Dominique Mouchiroud; Ioan Negrutiu; Deborah Charlesworth; Françoise Monéger
Journal:  PLoS Biol       Date:  2004-12-21       Impact factor: 8.029

5.  Genome-wide analyses of chitin synthases identify horizontal gene transfers towards bacteria and allow a robust and unifying classification into fungi.

Authors:  Isabelle R Gonçalves; Sophie Brouillet; Marie-Christine Soulié; Simonetta Gribaldo; Catherine Sirven; Noémie Charron; Martine Boccara; Mathias Choquer
Journal:  BMC Evol Biol       Date:  2016-11-24       Impact factor: 3.260

6.  A model of evolution with constant selective pressure for regulatory DNA sites.

Authors:  Farida N Enikeeva; Ekaterina A Kotelnikova; Mikhail S Gelfand; Vsevolod J Makeev
Journal:  BMC Evol Biol       Date:  2007-07-27       Impact factor: 3.260
  6 in total

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