Literature DB >> 10360687

The mechanisms of simultaneous stereoinversion, racemization, and isomerization at specific aspartyl residues of aged lens proteins.

N Fujii1, Y Momose, N Ishii, M Takita, M Akaboshi, M Kodama.   

Abstract

Proteins have been considered to consist exclusively of L-amino acids in living tissues. However, we found biologically uncommon D-aspartyl (Asp) residues at specific sites in alphaA- and alphaB-crystallin from the aged human lens (mean age: 80 years). In alphaB-crystallin, the Asp-36 and Asp-62 residues are highly racemized (D/L ratios: 0.92 for Asp-36; 0.54 for Asp-62). More interestingly, the configuration of the Asp-58 and Asp-151 residues in alphaA-crystallin is inverted to the D-isomer (D/L ratio: 3.1 for Asp-58, 5.7 for Asp-151). A D/L ratio > 1.0 is not considered to be due to racemization, but rather is thought to result from stereoconfiguration inversion. Our report was the first observation that inversion occurred in the configuration of amino acids in vivo during the natural aging process. We also found that these enantiomers were simultaneously isomerized to form beta-Asp residues. We propose that the mechanism of D- and beta-Asp formation in the protein depends on the primary structure and the presence of a chiral reaction field, which induces formation of D-Asp.

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Year:  1999        PMID: 10360687     DOI: 10.1016/s0047-6374(98)00129-8

Source DB:  PubMed          Journal:  Mech Ageing Dev        ISSN: 0047-6374            Impact factor:   5.432


  13 in total

1.  Soft tissue removal by maceration and feeding of Dermestes sp.: impact on morphological and biomolecular analyses of dental tissues in forensic medicine.

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Journal:  Int J Legal Med       Date:  2006-09-16       Impact factor: 2.686

2.  Racemization of two proteins over our lifespan: deamidation of asparagine 76 in γS crystallin is greater in cataract than in normal lenses across the age range.

Authors:  Michelle Yu Sung Hooi; Mark J Raftery; Roger John Willis Truscott
Journal:  Invest Ophthalmol Vis Sci       Date:  2012-06-14       Impact factor: 4.799

Review 3.  Stability of protein pharmaceuticals: an update.

Authors:  Mark Cornell Manning; Danny K Chou; Brian M Murphy; Robert W Payne; Derrick S Katayama
Journal:  Pharm Res       Date:  2010-02-09       Impact factor: 4.200

4.  The amino terminus of PKA catalytic subunit--a site for introduction of posttranslational heterogeneities by deamidation: D-Asp2 and D-isoAsp2 containing isozymes.

Authors:  V Kinzel; N König; R Pipkorn; D Bossemeyer; W D Lehmann
Journal:  Protein Sci       Date:  2000-11       Impact factor: 6.725

Review 5.  Extracellular matrix remodeling: the common denominator in connective tissue diseases. Possibilities for evaluation and current understanding of the matrix as more than a passive architecture, but a key player in tissue failure.

Authors:  Morten A Karsdal; Mette J Nielsen; Jannie M Sand; Kim Henriksen; Federica Genovese; Anne-Christine Bay-Jensen; Victoria Smith; Joanne I Adamkewicz; Claus Christiansen; Diana J Leeming
Journal:  Assay Drug Dev Technol       Date:  2012-10-09       Impact factor: 1.738

6.  Glutathionylation of lens proteins through the formation of thioether bond.

Authors:  Mikhail Linetsky; Roy D LeGrand
Journal:  Mol Cell Biochem       Date:  2005-04       Impact factor: 3.396

7.  A novel assay method for an amino acid racemase reaction based on circular dichroism.

Authors:  Masafumi Noda; Yasuyuki Matoba; Takanori Kumagai; Masanori Sugiyama
Journal:  Biochem J       Date:  2005-07-15       Impact factor: 3.857

8.  Site-specific rapid deamidation and isomerization in human lens αA-crystallin in vitro.

Authors:  Takumi Takata; Seongmin Ha; Tamaki Koide; Noriko Fujii
Journal:  Protein Sci       Date:  2020-01-16       Impact factor: 6.725

9.  In vitro reconstitution of the yeast spore wall dityrosine layer discloses the mechanism of its assembly.

Authors:  Leo D Bemena; Omar Mukama; Aaron M Neiman; Zijie Li; Xiao-Dong Gao; Hideki Nakanishi
Journal:  J Biol Chem       Date:  2017-08-09       Impact factor: 5.157

10.  Posttranslational modifications of the bovine lens beaded filament proteins filensin and CP49.

Authors:  Zhen Wang; Joy E Obidike; Kevin L Schey
Journal:  Invest Ophthalmol Vis Sci       Date:  2009-10-29       Impact factor: 4.799

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