Literature DB >> 10359655

Evidence that cysteine-166 is the active-site nucleophile of Pseudomonas aeruginosa amidase: crystallization and preliminary X-ray diffraction analysis of the enzyme.

S Farnaud1, R Tata, M K Sohi, T Wan, P R Brown, B J Sutton.   

Abstract

Wild-type and site-specific mutants C166S and C166A (Cys-166-->Ser and Cys-166-->Ala respectively) of the amidase (acylamide amidohydrolase, EC 3.5.1.4) from Pseudomonas aeruginosa were expressed in Escherichia coli by using the vector pKK223-3. Both mutant proteins were catalytically inactive but showed complete cross-reactivity with polyclonal antiserum raised against the wild-type enzyme, as well as CD spectra identical with that of the wild-type enzyme, which were indicative of correct folding. Cys-166 is therefore implicated as the active-site nucleophile. Titration of free thiol groups with 5,5'-dithiobis-(2-nitrobenzoic acid) indicated that Cys-166 is not a rapidly reacting residue. Crystals of both wild-type and C166S amidase grew with identical, rhombohedral morphology; X-ray diffraction analysis established the unit cell dimensions (a=b=c=84 A; alpha=beta=gamma=75 degrees) and space group (R3 or R32). These results imply a quaternary structure of six subunits, with most probably 32 symmetry; the existence of a hexameric structure was supported by molecular mass determinations based on gel filtration and electrophoretic mobility.

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Year:  1999        PMID: 10359655      PMCID: PMC1220302     

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  18 in total

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Journal:  Arch Biochem Biophys       Date:  1968-07       Impact factor: 4.013

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Authors:  P R Brown; P H Clarke
Journal:  J Gen Microbiol       Date:  1972-04

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Journal:  J Gen Microbiol       Date:  1969-08

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Journal:  Mol Gen Genet       Date:  1978-10-04

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Authors:  M Gregoriou; P R Brown
Journal:  Eur J Biochem       Date:  1979-05-02

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Authors:  R P Ambler; A D Auffret; P H Clarke
Journal:  FEBS Lett       Date:  1987-05-11       Impact factor: 4.124

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Journal:  J Bacteriol       Date:  1977-11       Impact factor: 3.490

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  7 in total

1.  Substitution of Glu-59 by Val in amidase from Pseudomonas aeruginosa results in a catalytically inactive enzyme.

Authors:  A Karmali; R Tata; P R Brown
Journal:  Mol Biotechnol       Date:  2000-09       Impact factor: 2.695

2.  The quaternary structure of the amidase from Geobacillus pallidus RAPc8 is revealed by its crystal packing.

Authors:  Vinod B Agarkar; Serah W Kimani; Donald A Cowan; Muhammed F-R Sayed; B Trevor Sewell
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-11-04

3.  Substitutions of Thr-103-Ile and Trp-138-Gly in amidase from Pseudomonas aeruginosa are responsible for altered kinetic properties and enzyme instability.

Authors:  A Karmali; R Pacheco; R Tata; P Brown
Journal:  Mol Biotechnol       Date:  2001-03       Impact factor: 2.695

4.  Support for a three-dimensional structure predicting a Cys-Glu-Lys catalytic triad for Pseudomonas aeruginosa amidase comes from site-directed mutagenesis and mutations altering substrate specificity.

Authors:  Carlos Novo; Sebastien Farnaud; Renée Tata; Alda Clemente; Paul R Brown
Journal:  Biochem J       Date:  2002-08-01       Impact factor: 3.857

5.  Crystallization, diffraction data collection and preliminary crystallographic analysis of hexagonal crystals of Pseudomonas aeruginosa amidase.

Authors:  Jorge Andrade; Amin Karmali; Maria A Carrondo; Carlos Frazão
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-02-23

6.  Monoclonal antibodies recognize conformational epitopes on wild-type and recombinant mutant amidases from pseudomonas aeruginosa.

Authors:  Sónia Martins; Sara Lourenço; Amin Karmali; Maria Luísa Serralheiro
Journal:  Mol Biotechnol       Date:  2007-10       Impact factor: 2.695

7.  Identification of essential residues in apolipoprotein N-acyl transferase, a member of the CN hydrolase family.

Authors:  Dominique Vidal-Ingigliardi; Shawn Lewenza; Nienke Buddelmeijer
Journal:  J Bacteriol       Date:  2007-04-06       Impact factor: 3.490

  7 in total

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