Literature DB >> 10356334

Partially formed native tertiary interactions in the A-state of cytochrome c.

D R Hostetter1, G T Weatherly, J R Beasley, K Bortone, D S Cohen, S A Finger, P Hardwidge, D S Kakouras, A J Saunders, S K Trojak, J C Waldner, G J Pielak.   

Abstract

Considerable insight into protein structure, stability, and folding has been obtained from studies of non-native states. We have studied the extent of native tertiary contacts in one such molecule, the A-state of yeast iso-1-ferricytochrome c. Previously, we showed that the interface between the N and C-terminal helices is completely formed in the A-state. Here, we focus on interactions essential for forming the heme pocket of eukaryotic cytochromes c. To determine the extent of these interactions, we used saturation mutagenesis at the evolutionarily invariant residue leucine 68, and measured the free energy of denaturation for the native states and the A-states of functional variants. We show that, unlike the interaction between the terminal helices, the native interactions between the 60s helix and the rest of the protein are not completely formed in the A-state. Copyright 1999 Academic Press.

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Year:  1999        PMID: 10356334     DOI: 10.1006/jmbi.1999.2764

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  5 in total

1.  Analysis of multiple folding routes of proteins by a coarse-grained dynamics model.

Authors:  B Erman
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

2.  Selective excitation of native fluctuations during thermal unfolding simulations: horse heart cytochrome c as a case study.

Authors:  Danilo Roccatano; Isabella Daidone; Marc-Antoine Ceruso; Cecilia Bossa; Alfredo Di Nola
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

3.  van't Hoff enthalpies without baselines.

Authors:  D M John; K M Weeks
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

4.  Site-directed nanoparticle labeling of cytochrome c.

Authors:  Marie-Eve Aubin-Tam; Wonmuk Hwang; Kimberly Hamad-Schifferli
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-26       Impact factor: 11.205

5.  The determinants of stability and folding in evolutionarily diverged cytochromes c.

Authors:  Megan C Thielges; Jörg Zimmermann; Philip E Dawson; Floyd E Romesberg
Journal:  J Mol Biol       Date:  2009-03-04       Impact factor: 5.469

  5 in total

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