Literature DB >> 10322174

DNA structure and transcription.

X Dai1, L B Rothman-Denes.   

Abstract

Regulation of transcription occurs through complex interactions of RNA polymerase and accessory proteins with specific DNA sequences and with each other. The DNA template topology influences the interaction of RNA polymerase with the promoter and its response to repressors, activators and the intracellular milieu through the formation of altered DNA structures or of nucleoprotein complexes. Recent developments on the role of DNA structures in transcription regulation are discussed.

Mesh:

Substances:

Year:  1999        PMID: 10322174     DOI: 10.1016/S1369-5274(99)80022-8

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  11 in total

1.  In vivo and in vitro effects of integration host factor at the DmpR-regulated sigma(54)-dependent Po promoter.

Authors:  C C Sze; A D Laurie; V Shingler
Journal:  J Bacteriol       Date:  2001-05       Impact factor: 3.490

Review 2.  Repression of transcription initiation in bacteria.

Authors:  F Rojo
Journal:  J Bacteriol       Date:  1999-05       Impact factor: 3.490

3.  Biopolymer Chain Elasticity: A novel concept and a least deformation energy principle predicts backbone and overall folding of DNA TTT hairpins in agreement with NMR distances.

Authors:  Christophe Pakleza; Jean A H Cognet
Journal:  Nucleic Acids Res       Date:  2003-02-01       Impact factor: 16.971

4.  Cellular pathways controlling integron cassette site folding.

Authors:  Céline Loot; David Bikard; Anna Rachlin; Didier Mazel
Journal:  EMBO J       Date:  2010-07-13       Impact factor: 11.598

Review 5.  DNA triplet repeat expansion and mismatch repair.

Authors:  Ravi R Iyer; Anna Pluciennik; Marek Napierala; Robert D Wells
Journal:  Annu Rev Biochem       Date:  2015-01-02       Impact factor: 23.643

6.  NFX1 plays a role in human papillomavirus type 16 E6 activation of NFkappaB activity.

Authors:  Mei Xu; Rachel A Katzenellenbogen; Carla Grandori; Denise A Galloway
Journal:  J Virol       Date:  2010-08-25       Impact factor: 5.103

7.  Axial distortion as a sensor of supercoil changes: a molecular model for the homeostatic regulation of DNA gyrase.

Authors:  S Unniraman; V Nagaraja
Journal:  J Genet       Date:  2001-12       Impact factor: 1.166

8.  The genome-wide distribution of non-B DNA motifs is shaped by operon structure and suggests the transcriptional importance of non-B DNA structures in Escherichia coli.

Authors:  Xiangjun Du; Damian Wojtowicz; Albert A Bowers; David Levens; Craig J Benham; Teresa M Przytycka
Journal:  Nucleic Acids Res       Date:  2013-04-25       Impact factor: 16.971

9.  Helical coherence of DNA in crystals and solution.

Authors:  Aaron Wynveen; Dominic J Lee; Alexei A Kornyshev; Sergey Leikin
Journal:  Nucleic Acids Res       Date:  2008-08-28       Impact factor: 16.971

10.  Superhelical destabilization in regulatory regions of stress response genes.

Authors:  Huiquan Wang; Craig J Benham
Journal:  PLoS Comput Biol       Date:  2008-01       Impact factor: 4.475

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