Literature DB >> 10320321

Protein-nucleic acid interactions during open complex formation investigated by systematic alteration of the protein and DNA binding partners.

J D Helmann1, P L deHaseth.   

Abstract

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Year:  1999        PMID： 10320321     DOI： 10.1021/bi990206g

Source DB:  PubMed          Journal:  Biochemistry        ISSN： 0006-2960            Impact factor:   3.162


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  66 in total

1.  Bacterial promoter architecture: subsite structure of UP elements and interactions with the carboxy-terminal domain of the RNA polymerase alpha subunit.

Authors:  S T Estrem; W Ross; T Gaal; Z W Chen; W Niu; R H Ebright; R L Gourse
Journal:  Genes Dev       Date:  1999-08-15       Impact factor: 11.361

2.  Escherichia coli promoter opening and -10 recognition: mutational analysis of sigma70.

Authors:  M S Fenton; S J Lee; J D Gralla
Journal:  EMBO J       Date:  2000-03-01       Impact factor: 11.598

3.  Strong minor groove base conservation in sequence logos implies DNA distortion or base flipping during replication and transcription initiation.

Authors:  T D Schneider
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

4.  Function of the bacterial TATAAT -10 element as single-stranded DNA during RNA polymerase isomerization.

Authors:  M S Fenton; J D Gralla
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-24       Impact factor: 11.205

5.  Marking the start site of RNA polymerase III transcription: the role of constraint, compaction and continuity of the transcribed DNA strand.

Authors:  Anne Grove; Morgan S Adessa; E Peter Geiduschek; George A Kassavetis
Journal:  EMBO J       Date:  2002-02-15       Impact factor: 11.598

6.  Interaction of RNA polymerase with forked DNA: evidence for two kinetically significant intermediates on the pathway to the final complex.

Authors:  Laura Tsujikawa; Oleg V Tsodikov; Pieter L deHaseth
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-12       Impact factor: 11.205

7.  Formation of intermediate transcription initiation complexes at pfliD and pflgM by sigma(28) RNA polymerase.

Authors:  J R Givens; C L McGovern; A J Dombroski
Journal:  J Bacteriol       Date:  2001-11       Impact factor: 3.490

8.  The RNA polymerase III transcription initiation factor TFIIIB participates in two steps of promoter opening.

Authors:  G A Kassavetis; G A Letts; E P Geiduschek
Journal:  EMBO J       Date:  2001-06-01       Impact factor: 11.598

9.  Topography of lacUV5 initiation complexes.

Authors:  V Studitsky; K Brodolin; Y Liu; A Mirzabekov
Journal:  Nucleic Acids Res       Date:  2001-02-01       Impact factor: 16.971

10.  Promoter opening by sigma(54) and sigma(70) RNA polymerases: sigma factor-directed alterations in the mechanism and tightness of control.

Authors:  Y Guo; C M Lew; J D Gralla
Journal:  Genes Dev       Date:  2000-09-01       Impact factor: 11.361
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