Literature DB >> 10318395

Automatic indexing of pathology data.

G S Dunham, M G Pacak, A W Pratt.   

Abstract

A procedure for automated indexing of pathology diagnostic reports at the National Institutes of Health is described. Diagnostic statements in medical English are encoded by computer into the Systematized Nomenclature of Pathology (SNOP). SNOP is a structured indexing language constructed by pathologists for manual indexing. It is of interest that effective automatic encoding can be based upon an existing vocabulary and code designed for manual methods. Morphosyntactic analysis, a simple syntax analysis, matching of dictionary entries consisting of several words, and synonym substitutions are techniques utilized.

Mesh：

Year:  1978        PMID： 10318395     DOI： 10.1002/asi.4630290207

Source DB:  PubMed          Journal:  J Am Soc Inf Sci        ISSN： 0002-8231


  7 in total

1.  Using a statistical natural language Parser augmented with the UMLS specialist lexicon to assign SNOMED CT codes to anatomic sites and pathologic diagnoses in full text pathology reports.

Authors:  Henry J Lowe; Yang Huang; Donald P Regula
Journal:  AMIA Annu Symp Proc       Date:  2009-11-14

2.  Automating tissue bank annotation from pathology reports - comparison to a gold standard expert annotation set.

Authors:  Kaihong Liu; Kevin J Mitchell; Wendy W Chapman; Rebecca S Crowley
Journal:  AMIA Annu Symp Proc       Date:  2005

Review 3.  Natural language processing and the representation of clinical data.

Authors:  N Sager; M Lyman; C Bucknall; N Nhan; L J Tick
Journal:  J Am Med Inform Assoc       Date:  1994 Mar-Apr       Impact factor: 4.497

4.  Data base design for natural language medical data.

Authors:  G Story; L Hirschman
Journal:  J Med Syst       Date:  1982-02       Impact factor: 4.460

5.  The feasibility of using natural language processing to extract clinical information from breast pathology reports.

Authors:  Julliette M Buckley; Suzanne B Coopey; John Sharko; Fernanda Polubriaginof; Brian Drohan; Ahmet K Belli; Elizabeth M H Kim; Judy E Garber; Barbara L Smith; Michele A Gadd; Michelle C Specht; Constance A Roche; Thomas M Gudewicz; Kevin S Hughes
Journal:  J Pathol Inform       Date:  2012-06-30

6.  Chapter 13: Mining electronic health records in the genomics era.

Authors:  Joshua C Denny
Journal:  PLoS Comput Biol       Date:  2012-12-27       Impact factor: 4.475

7.  A Question-and-Answer System to Extract Data From Free-Text Oncological Pathology Reports (CancerBERT Network): Development Study.

Authors:  Joseph Ross Mitchell; Phillip Szepietowski; Rachel Howard; Phillip Reisman; Jennie D Jones; Patricia Lewis; Brooke L Fridley; Dana E Rollison
Journal:  J Med Internet Res       Date:  2022-03-23       Impact factor: 7.076
  7 in total

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