Literature DB >> 10231032

Prediction of the coding sequences of unidentified human genes. XIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.

T Nagase1, K Ishikawa, M Suyama, R Kikuno, M Hirosawa, N Miyajima, A Tanaka, H Kotani, N Nomura, O Ohara.   

Abstract

As a part of our cDNA project for deducing the coding sequence of unidentified human genes, we newly determined the sequences of 100 cDNA clones from a set of size-fractionated human brain cDNA libraries, and predicted the coding sequences of the corresponding genes, named KIAA0919 to KIAA1018. The sequencing of these clones revealed that the average sizes of the inserts and corresponding open reading frames were 4.9 kb and 2.6 kb (882 amino acid residues), respectively. A computer search of the sequences against the public databases indicated that predicted coding sequences of 87 genes contained sequences similar to known genes, 53% of which (46 genes) were categorized as proteins relating to cell signaling/communication, cell structure/motility and nucleic acid management. The chromosomal locations of the genes were determined by using human-rodent hybrid panels unless their mapping data were already available in the public databases. The expression profiles of all the genes among 10 human tissues, 8 brain regions (amygdala, corpus callosum, cerebellum, caudate nucleus, hippocampus, substania nigra, subthalamic nucleus, and thalamus), spinal cord, fetal brain and fetal liver were also examined by reverse transcription-coupled polymerase chain reaction, products of which were quantified by enzyme-linked immunosorbent assay.

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Year:  1999        PMID: 10231032     DOI: 10.1093/dnares/6.1.63

Source DB:  PubMed          Journal:  DNA Res        ISSN: 1340-2838            Impact factor:   4.458


  34 in total

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Authors:  A A Postigo; D C Dean
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

2.  STAMP, a novel predicted factor assisting TIF2 actions in glucocorticoid receptor-mediated induction and repression.

Authors:  Yuanzheng He; S Stoney Simons
Journal:  Mol Cell Biol       Date:  2006-11-20       Impact factor: 4.272

Review 3.  Review of the phenotypic spectrum associated with haploinsufficiency of MYRF.

Authors:  Linda Z Rossetti; Kevin Glinton; Bo Yuan; Pengfei Liu; Nishitha Pillai; Elizabeth Mizerik; Pilar Magoulas; Jill A Rosenfeld; Lefkothea Karaviti; Vernon R Sutton; Seema R Lalani; Daryl A Scott
Journal:  Am J Med Genet A       Date:  2019-05-08       Impact factor: 2.802

4.  Two-marker association tests yield new disease associations for coronary artery disease and hypertension.

Authors:  Thomas P Slavin; Tao Feng; Audrey Schnell; Xiaofeng Zhu; Robert C Elston
Journal:  Hum Genet       Date:  2011-05-28       Impact factor: 4.132

5.  Densin-180 forms a ternary complex with the (alpha)-subunit of Ca2+/calmodulin-dependent protein kinase II and (alpha)-actinin.

Authors:  R S Walikonis; A Oguni; E M Khorosheva; C J Jeng; F J Asuncion; M B Kennedy
Journal:  J Neurosci       Date:  2001-01-15       Impact factor: 6.167

6.  A novel class of gene controlling virulence in plant pathogenic ascomycete fungi.

Authors:  Shun-Wen Lu; Scott Kroken; Bee-Na Lee; Barbara Robbertse; Alice C L Churchill; O C Yoder; B Gillian Turgeon
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-02       Impact factor: 11.205

7.  Chromosomal map of human brain malformations.

Authors:  Nataliya Tyshchenko; Iosif Lurie; Albert Schinzel
Journal:  Hum Genet       Date:  2008-06-18       Impact factor: 4.132

8.  The PDZ and band 4.1 containing protein Frmpd1 regulates the subcellular location of activator of G-protein signaling 3 and its interaction with G-proteins.

Authors:  Ningfei An; Joe B Blumer; Michael L Bernard; Stephen M Lanier
Journal:  J Biol Chem       Date:  2008-06-19       Impact factor: 5.157

9.  Subtelomeric deletion of chromosome 10p15.3: clinical findings and molecular cytogenetic characterization.

Authors:  Cheryl DeScipio; Laura Conlin; Jill Rosenfeld; James Tepperberg; Romela Pasion; Ankita Patel; Marie T McDonald; Swaroop Aradhya; Darlene Ho; Jennifer Goldstein; Marianne McGuire; Surabhi Mulchandani; Livija Medne; Rosemarie Rupps; Alvaro H Serrano; Erik C Thorland; Anne C-H Tsai; Yvonne Hilhorst-Hofstee; Claudia A L Ruivenkamp; Hilde Van Esch; Marie-Claude Addor; Danielle Martinet; Thornton B A Mason; Dinah Clark; Nancy B Spinner; Ian D Krantz
Journal:  Am J Med Genet A       Date:  2012-07-27       Impact factor: 2.802

10.  Characterization of a SEPT9 interacting protein, SEPT14, a novel testis-specific septin.

Authors:  Esther A Peterson; Linda M Kalikin; Jonathan D Steels; Mathew P Estey; William S Trimble; Elizabeth M Petty
Journal:  Mamm Genome       Date:  2007-10-06       Impact factor: 2.957

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