Literature DB >> 10218106

Adenylosuccinate synthetase: recent developments.

R B Honzatko1, M M Stayton, H J Fromm.   

Abstract

By exerting strategic control on purine nucleotide biosynthesis, and by engaging GTP-dependent transphosphorylation of IMP to activate loss of an oxygen atom during catalysis, adenylosuccinate synthetase remains as enzyme that justifiably fascinates students of enzyme catalysis. This review describes how the balanced application of X-ray crystallography and enzyme kinetics has advanced the comprehension of the catalytic and regulatory properties of adenylosuccinate synthetase. Detailed analysis has demonstrated the formation of 6-phosphoryl-IMP, an intermediate originally postulated over 40 years ago on the basis of oxygen-18 exchange experiments showing that position-6 oxygen of IMP becomes incorporated into phosphate. Inferences about the participation of amino acid side-chains that stabilize 6-P-IMP during catalysis have also been confirmed by site-directed mutagenesis and examination of such mutations on various kinetic parameters. Moreover, the action of certain regulatory ligands have also been viewed at atomic level resolution. For example, magnesium ion and GDP can induce conformational changes linked to the stabilization of one of two known conformations of the so-called 40s loop. Another significant finding is that two magnesium ions play fundamental roles: one binding with high affinity to the substrate GTP, and a second binding with lower affinity to the co-substrate aspartate. These structural and kinetic studies have also formed the basis for clarifying the action of various inhibitors and potentially important pharmacologic agents with this key regulatory enzyme. Finally, this review explores the current status of investigations on gene structure and gene expression in a number of organisms.

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Year:  1999        PMID: 10218106

Source DB:  PubMed          Journal:  Adv Enzymol Relat Areas Mol Biol        ISSN: 0065-258X


  4 in total

1.  Overexpression, purification, crystallization and preliminary crystallographic studies of a hyperthermophilic adenylosuccinate synthetase from Pyrococcus horikoshii OT3.

Authors:  Xiaoying Wang; Ryogo Akasaka; Chie Takemoto; Satoshi Morita; Machiko Yamaguchi; Takaho Terada; Mikako Shirozu; Shigeyuki Yokoyama; Shilin Chen; Shuyi Si; Yong Xie
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-11-25

2.  Cavitation as a mechanism of substrate discrimination by adenylosuccinate synthetases.

Authors:  Cristina V Iancu; Yang Zhou; Tudor Borza; Herbert J Fromm; Richard B Honzatko
Journal:  Biochemistry       Date:  2006-09-26       Impact factor: 3.162

3.  In the quest for new targets for pathogen eradication: the adenylosuccinate synthetase from the bacterium Helicobacter pylori.

Authors:  Ante Bubić; Natalia Mrnjavac; Igor Stuparević; Marta Łyczek; Beata Wielgus-Kutrowska; Agnieszka Bzowska; Marija Luić; Ivana Leščić Ašler
Journal:  J Enzyme Inhib Med Chem       Date:  2018-12       Impact factor: 5.051

4.  Co-sequencing and novel delayed anti-correlation identify function for pancreatic enriched microRNA biomarkers in a rat model of acute pancreatic injury.

Authors:  Zhihua Li; Rodney Rouse
Journal:  BMC Genomics       Date:  2018-04-27       Impact factor: 3.969

  4 in total

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