Literature DB >> 10217508

The abfB gene encoding the major alpha-L-arabinofuranosidase of Aspergillus nidulans: nucleotide sequence, regulation and construction of a disrupted strain.

Marco Gielkens1, Luis González-Candelas2, Paloma Sánchez-Torres2, Peter van de Vondervoort1, Leo de Graaff1, Jaap Visser1, Daniel Ramón2.   

Abstract

Using a DNA fragment containing the Aspergillus niger abfB gene as a probe, the homologous Aspergillus nidulans gene, designated abfB, has been cloned from a genomic library containing size-selected HindIII fragments. The nucleotide sequence of the A. nidulans abfB gene shows strong homology with the A. niger abfB, Trichoderma reesei abf-1 and Trichoderma koningii alpha-L-arabinofuranosidase/beta-xylosidase genes. Regulation of abfB expression has been investigated in cultures induced with L-arabitol. The accumulation of abfB mRNA, total alpha-L-arabinofuranosidase activity and AbfB protein levels have been determined in a wild-type A. nidulans strain as well as in different mutant strains. These strains are affected either in their response to ambient pH (paIA1 and pacC(c)14 mutants), carbon catabolite repression (creA(d)4 mutant), the ability to utilize L-arabitol as a carbon source (araA1 mutant) or a combination of both latter genotypes (araA1 creA(d)4). The results obtained indicate that the expression of the A. nidulans abfB gene was higher at acidic pHs and was superinduced in this double mutant. Furthermore, disruption of the abfB gene demonstrated that in A. nidulans AbfB is the major p-nitrophenyl alpha-L-arabinofuranoside-hydrolysing activity but at least one minor activity is expressed, which is involved in the release of L-arabinose from polysaccharides.

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Year:  1999        PMID: 10217508     DOI: 10.1099/13500872-145-3-735

Source DB:  PubMed          Journal:  Microbiology        ISSN: 1350-0872            Impact factor:   2.777


  12 in total

Review 1.  Regulation of gene expression by ambient pH in filamentous fungi and yeasts.

Authors:  Miguel A Peñalva; Herbert N Arst
Journal:  Microbiol Mol Biol Rev       Date:  2002-09       Impact factor: 11.056

Review 2.  Aspergillus enzymes involved in degradation of plant cell wall polysaccharides.

Authors:  R P de Vries; J Visser
Journal:  Microbiol Mol Biol Rev       Date:  2001-12       Impact factor: 11.056

3.  Development and application of a suite of polysaccharide-degrading enzymes for analyzing plant cell walls.

Authors:  Stefan Bauer; Prasanna Vasu; Staffan Persson; Andrew J Mort; Chris R Somerville
Journal:  Proc Natl Acad Sci U S A       Date:  2006-07-14       Impact factor: 11.205

4.  Molecular regulation of arabinan and L-arabinose metabolism in Hypocrea jecorina (Trichoderma reesei).

Authors:  Eda Akel; Benjamin Metz; Bernhard Seiboth; Christian P Kubicek
Journal:  Eukaryot Cell       Date:  2009-10-02

5.  Purification and functional characterization of a novel alpha-L-arabinofuranosidase from Bifidobacterium longum B667.

Authors:  Abelardo Margolles; Clara G de los Reyes-Gavilán
Journal:  Appl Environ Microbiol       Date:  2003-09       Impact factor: 4.792

6.  The effects of extracellular pH and of the transcriptional regulator PACI on the transcriptome of Trichoderma reesei.

Authors:  Mari Häkkinen; Dhinakaran Sivasiddarthan; Nina Aro; Markku Saloheimo; Tiina M Pakula
Journal:  Microb Cell Fact       Date:  2015-04-30       Impact factor: 5.328

7.  A novel fungal metal-dependent α-L-arabinofuranosidase of family 54 glycoside hydrolase shows expanded substrate specificity.

Authors:  Maria Lorenza Leal Motta; Jaire Alves Ferreira Filho; Ricardo Rodrigues de Melo; Leticia Maria Zanphorlin; Clelton Aparecido Dos Santos; Anete Pereira de Souza
Journal:  Sci Rep       Date:  2021-05-26       Impact factor: 4.379

8.  Regulation of cellulase and hemicellulase gene expression in fungi.

Authors:  Antonella Amore; Simona Giacobbe; Vincenza Faraco
Journal:  Curr Genomics       Date:  2013-06       Impact factor: 2.236

9.  Identification and Characterization of a Novel Galactofuranose-Specific β-D-Galactofuranosidase from Streptomyces Species.

Authors:  Emiko Matsunaga; Yujiro Higuchi; Kazuki Mori; Nao Yairo; Takuji Oka; Saki Shinozuka; Kosuke Tashiro; Minoru Izumi; Satoru Kuhara; Kaoru Takegawa
Journal:  PLoS One       Date:  2015-09-04       Impact factor: 3.240

10.  Effects of ascorbic acid on α-l-arabinofuranosidase and α-l-arabinopyranosidase activities from Bifidobacterium longum RD47 and its application to whole cell bioconversion of ginsenoside.

Authors:  Seockmo Ku; Hyun Ju You; Myeong Soo Park; Geun Eog Ji
Journal:  J Korean Soc Appl Biol Chem       Date:  2015-08-27
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