Literature DB >> 10208008

An example of microsatellite length variation in the mitochondrial genome of conifers.

N Soranzo1, J Provan, W Powell.   

Abstract

In the present study, the intergenic region between the mitochondrial genes encoding subunit 3 of NADH dehydrogenase (nad3) and ribosomal protein S12 (rps12) was shown to contain a Gn mononucleotide microsatellite repeat. This region was analysed in 15 species belonging to the genus Pinus and interspecific variation was detected in the form of repeat length polymorphism. Sequence analysis of a 576-bp region containing the microsatellite confirmed that the variability was due to expansion and contraction of the repeat motif and that no point mutations were present in the coding regions of the two genes. This is the first report of the occurrence of a microsatellite polymorphism in plant mitochondria.

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Year:  1999        PMID: 10208008

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  12 in total

1.  Cross-species amplification of mitochondrial DNA sequence-tagged-site markers in conifers: the nature of polymorphism and variation within and among species in Picea.

Authors:  J P Jaramillo-Correa; J Bousquet; J Beaulieu; N Isabel; M Perron; M Bouillé
Journal:  Theor Appl Genet       Date:  2003-02-13       Impact factor: 5.699

2.  Phylogenetic analysis of Oryza species, based on simple sequence repeats and their flanking nucleotide sequences from the mitochondrial and chloroplast genomes.

Authors:  Tomotaro Nishikawa; Duncan A Vaughan; Koh-ichi Kadowaki
Journal:  Theor Appl Genet       Date:  2005-01-14       Impact factor: 5.699

Review 3.  Advances in molecular marker techniques and their applications in plant sciences.

Authors:  Milee Agarwal; Neeta Shrivastava; Harish Padh
Journal:  Plant Cell Rep       Date:  2008-02-02       Impact factor: 4.570

4.  Characterization of a mosaic minisatellite locus in the mitochondrial DNA of Norway spruce [Picea abies (L.) Karst.].

Authors:  D Bastien; J M Favre; A M Collignon; C Sperisen; S Jeandroz
Journal:  Theor Appl Genet       Date:  2003-05-15       Impact factor: 5.699

5.  Organelle Simple Sequence Repeat Markers Help to Distinguish Carpelloid Stamen and Normal Cytoplasmic Male Sterile Sources in Broccoli.

Authors:  Jinshuai Shu; Yumei Liu; Zhansheng Li; Lili Zhang; Zhiyuan Fang; Limei Yang; Mu Zhuang; Yangyong Zhang; Honghao Lv
Journal:  PLoS One       Date:  2015-09-25       Impact factor: 3.240

6.  PMDBase: a database for studying microsatellite DNA and marker development in plants.

Authors:  Jingyin Yu; Komivi Dossa; Linhai Wang; Yanxin Zhang; Xin Wei; Boshou Liao; Xiurong Zhang
Journal:  Nucleic Acids Res       Date:  2016-10-12       Impact factor: 16.971

7.  Glacial vicariance in Eurasia: mitochondrial DNA evidence from Scots pine for a complex heritage involving genetically distinct refugia at mid-northern latitudes and in Asia Minor.

Authors:  Krassimir Naydenov; Sauphie Senneville; Jean Beaulieu; Francine Tremblay; Jean Bousquet
Journal:  BMC Evol Biol       Date:  2007-11-22       Impact factor: 3.260

8.  Genetic characterization of Gaddi goat breed of Western Himalayas using microsatellite markers.

Authors:  Gurdeep Singh; Yashpal Thakur; Amitoz Kour; Varun Sankhyan; Sanjeet Katoch
Journal:  Vet World       Date:  2015-04-22

Review 9.  Microsatellites in Pursuit of Microbial Genome Evolution.

Authors:  Abdullah F Saeed; Rongzhi Wang; Shihua Wang
Journal:  Front Microbiol       Date:  2016-01-05       Impact factor: 5.640

10.  Study of phylogenetic relationship of Turkish species of Klasea (Asteraceae) based on ISSR amplification.

Authors:  Bekir Dogan; Ahmet Duran; Meryem Şeker; Özlem Çetin; Esra Martin
Journal:  PhytoKeys       Date:  2015-09-24       Impact factor: 1.635

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