Literature DB >> 10200256

The Cys4 zinc finger of bacteriophage T7 primase in sequence-specific single-stranded DNA recognition.

T Kusakabe1, A V Hine, S G Hyberts, C C Richardson.   

Abstract

Bacteriophage T7 DNA primase recognizes 5'-GTC-3' in single-stranded DNA. The primase contains a single Cys4 zinc-binding motif that is essential for recognition. Biochemical and mutagenic analyses suggest that the Cys4 motif contacts cytosine of 5'-GTC-3' and may also contribute to thymine recognition. Residues His33 and Asp31 are critical for these interactions. Biochemical analysis also reveals that T7 primase selectively binds CTP in the absence of DNA. We propose that bound CTP selects the remaining base G, of 5'-GTC-3', by base pairing. Our deduced mechanism for recognition of ssDNA by Cys4 motifs bears little resemblance to the recognition of trinucleotides of double-stranded DNA by Cys2His2 zinc fingers.

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Year:  1999        PMID: 10200256      PMCID: PMC16326          DOI: 10.1073/pnas.96.8.4295

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

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Authors:  T A Cha; B M Alberts
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6.  Active center rearrangement in RNA polymerase initiation complex.

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Authors:  L V Mendelman; S M Notarnicola; C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

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Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-07       Impact factor: 11.205

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Authors:  L V Mendelman; C C Richardson
Journal:  J Biol Chem       Date:  1991-12-05       Impact factor: 5.157

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  28 in total

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8.  DNA inhibits catalysis by the carboxyltransferase subunit of acetyl-CoA carboxylase: implications for active site communication.

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9.  Mechanism of sequence-specific template binding by the DNA primase of bacteriophage T7.

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10.  Class-specific restrictions define primase interactions with DNA template and replicative helicase.

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