Literature DB >> 10197984

Human step II splicing factor hSlu7 functions in restructuring the spliceosome between the catalytic steps of splicing.

K Chua1, R Reed.   

Abstract

The spliceosome catalyzes pre-mRNA splicing in two steps. After catalytic step I, a major remodeling of the spliceosome occurs to establish the active site for step II. Here, we report the isolation of a cDNA encoding hSlu7, the human homolog of the yeast second step splicing factor Slu7. We show that hSlu7 associates with the spliceosome late in the splicing pathway, but at a stage prior to recognition of the 3' splice site for step II. In the absence of hSlu7, splicing is stalled between the catalytic steps in a novel complex, the CDeltahSlu7 complex. We provide evidence that this complex differs significantly in structure from the known spliceosomal complexes, yet is a functional intermediate between the catalytic steps of splicing. Together, our observations indicate that hSlu7 is required for a structural alteration of the spliceosome prior to the establishment of the catalytically active spliceosome for step II.

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Year:  1999        PMID: 10197984      PMCID: PMC316594          DOI: 10.1101/gad.13.7.841

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  59 in total

1.  The organization of 3' splice-site sequences in mammalian introns.

Authors:  R Reed
Journal:  Genes Dev       Date:  1989-12       Impact factor: 11.361

2.  U4 small nuclear RNA dissociates from a yeast spliceosome and does not participate in the subsequent splicing reaction.

Authors:  S L Yean; R J Lin
Journal:  Mol Cell Biol       Date:  1991-11       Impact factor: 4.272

3.  U5 snRNA interacts with exon sequences at 5' and 3' splice sites.

Authors:  A J Newman; C Norman
Journal:  Cell       Date:  1992-02-21       Impact factor: 41.582

4.  PRP16 is an RNA-dependent ATPase that interacts transiently with the spliceosome.

Authors:  B Schwer; C Guthrie
Journal:  Nature       Date:  1991-02-07       Impact factor: 49.962

5.  Primary structure of the human splicing factor ASF reveals similarities with Drosophila regulators.

Authors:  H Ge; P Zuo; J L Manley
Journal:  Cell       Date:  1991-07-26       Impact factor: 41.582

6.  Protein composition of mammalian spliceosomes assembled in vitro.

Authors:  R Reed
Journal:  Proc Natl Acad Sci U S A       Date:  1990-10       Impact factor: 11.205

7.  PRP18, a protein required for the second reaction in pre-mRNA splicing.

Authors:  U Vijayraghavan; J Abelson
Journal:  Mol Cell Biol       Date:  1990-01       Impact factor: 4.272

8.  An evolutionarily conserved U5 snRNP-specific protein is a GTP-binding factor closely related to the ribosomal translocase EF-2.

Authors:  P Fabrizio; B Laggerbauer; J Lauber; W S Lane; R Lührmann
Journal:  EMBO J       Date:  1997-07-01       Impact factor: 11.598

9.  Intron sequences involved in lariat formation during pre-mRNA splicing.

Authors:  R Reed; T Maniatis
Journal:  Cell       Date:  1985-05       Impact factor: 41.582

10.  Functional expression of cloned human splicing factor SF2: homology to RNA-binding proteins, U1 70K, and Drosophila splicing regulators.

Authors:  A R Krainer; A Mayeda; D Kozak; G Binns
Journal:  Cell       Date:  1991-07-26       Impact factor: 41.582

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  30 in total

1.  Metal ion catalysis during the exon-ligation step of nuclear pre-mRNA splicing: extending the parallels between the spliceosome and group II introns.

Authors:  P M Gordon; E J Sontheimer; J A Piccirilli
Journal:  RNA       Date:  2000-02       Impact factor: 4.942

2.  Evidence for a linear search in bimolecular 3' splice site AG selection.

Authors:  S Chen; K Anderson; M J Moore
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-18       Impact factor: 11.205

3.  Role of the 3' splice site in U12-dependent intron splicing.

Authors:  R C Dietrich; M J Peris; A S Seyboldt; R A Padgett
Journal:  Mol Cell Biol       Date:  2001-03       Impact factor: 4.272

4.  Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis.

Authors:  Melissa S Jurica; Lawrence J Licklider; Steven R Gygi; Nikolaus Grigorieff; Melissa J Moore
Journal:  RNA       Date:  2002-04       Impact factor: 4.942

5.  PSF and p54nrb bind a conserved stem in U5 snRNA.

Authors:  Rui Peng; Billy T Dye; Ismael Pérez; Daron C Barnard; Amanda B Thompson; James G Patton
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

Review 6.  Analysis of the splicing machinery in fission yeast: a comparison with budding yeast and mammals.

Authors:  N F Käufer; J Potashkin
Journal:  Nucleic Acids Res       Date:  2000-08-15       Impact factor: 16.971

7.  Reversible inhibition of the second step of splicing suggests a possible role of zinc in the second step of splicing.

Authors:  Noam Shomron; Hadar Malca; Ida Vig; Gil Ast
Journal:  Nucleic Acids Res       Date:  2002-10-01       Impact factor: 16.971

8.  Splicing factor hSlu7 contains a unique functional domain required to retain the protein within the nucleus.

Authors:  Noam Shomron; Mika Reznik; Gil Ast
Journal:  Mol Biol Cell       Date:  2004-06-04       Impact factor: 4.138

9.  The carboxy terminal WD domain of the pre-mRNA splicing factor Prp17p is critical for function.

Authors:  L A Lindsey-Boltz; G Chawla; N Srinivasan; U Vijayraghavan; M A Garcia-Blanco
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

10.  Cryo-EM structure of a human spliceosome activated for step 2 of splicing.

Authors:  Karl Bertram; Dmitry E Agafonov; Wen-Ti Liu; Olexandr Dybkov; Cindy L Will; Klaus Hartmuth; Henning Urlaub; Berthold Kastner; Holger Stark; Reinhard Lührmann
Journal:  Nature       Date:  2017-01-11       Impact factor: 49.962

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