Literature DB >> 10091653

Physicochemical consequences of amino acid variations that contribute to fibril formation by immunoglobulin light chains.

R Raffen1, L J Dieckman, M Szpunar, C Wunschl, P R Pokkuluri, P Dave, P Wilkins Stevens, X Cai, M Schiffer, F J Stevens.   

Abstract

The most common form of systemic amyloidosis originates from antibody light chains. The large number of amino acid variations that distinguish amyloidogenic from nonamyloidogenic light chain proteins has impeded our understanding of the structural basis of light-chain fibril formation. Moreover, even among the subset of human light chains that are amyloidogenic, many primary structure differences are found. We compared the thermodynamic stabilities of two recombinant kappa4 light-chain variable domains (V(L)s) derived from amyloidogenic light chains with a V(L) from a benign light chain. The amyloidogenic V(L)s were significantly less stable than the benign V(L). Furthermore, only the amyloidogenic V(L)s formed fibrils under native conditions in an in vitro fibril formation assay. We used site-directed mutagenesis to examine the consequences of individual amino acid substitutions found in the amyloidogenic V(L)s on stability and fibril formation capability. Both stabilizing and destabilizing mutations were found; however, only destabilizing mutations induced fibril formation in vitro. We found that fibril formation by the benign V(L) could be induced by low concentrations of a denaturant. This indicates that there are no structural or sequence-specific features of the benign V(L) that are incompatible with fibril formation, other than its greater stability. These studies demonstrate that the V(L) beta-domain structure is vulnerable to destabilizing mutations at a number of sites, including complementarity determining regions (CDRs), and that loss of variable domain stability is a major driving force in fibril formation.

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Year:  1999        PMID: 10091653      PMCID: PMC2144278          DOI: 10.1110/ps.8.3.509

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  42 in total

Review 1.  Domain stability in immunoglobulin light chain deposition disorders.

Authors:  R Wetzel
Journal:  Adv Protein Chem       Date:  1997

2.  Structural and functional characterization of three human immunoglobulin kappa light chains with different pathological implications.

Authors:  V Bellotti; M Stoppini; P P Mangione; A Fornasieri; L Min; G Merlini; G Ferri
Journal:  Biochim Biophys Acta       Date:  1996-12-16

3.  Beta-turn propensities as paradigms for the analysis of structural motifs to engineer protein stability.

Authors:  E C Ohage; W Graml; M M Walter; S Steinbacher; B Steipe
Journal:  Protein Sci       Date:  1997-01       Impact factor: 6.725

4.  Instability, unfolding and aggregation of human lysozyme variants underlying amyloid fibrillogenesis.

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Journal:  Nature       Date:  1997-02-27       Impact factor: 49.962

5.  Tertiary structure of an amyloid immunoglobulin light chain protein: a proposed model for amyloid fibril formation.

Authors:  N Schormann; J R Murrell; J J Liepnieks; M D Benson
Journal:  Proc Natl Acad Sci U S A       Date:  1995-10-10       Impact factor: 11.205

Review 6.  Staphylococcal nuclease: a showcase of m-value effects.

Authors:  D Shortle
Journal:  Adv Protein Chem       Date:  1995

7.  A role for destabilizing amino acid replacements in light-chain amyloidosis.

Authors:  M R Hurle; L R Helms; L Li; W Chan; R Wetzel
Journal:  Proc Natl Acad Sci U S A       Date:  1994-06-07       Impact factor: 11.205

8.  Destabilizing loop swaps in the CDRs of an immunoglobulin VL domain.

Authors:  L R Helms; R Wetzel
Journal:  Protein Sci       Date:  1995-10       Impact factor: 6.725

9.  A molecular model for self-assembly of amyloid fibrils: immunoglobulin light chains.

Authors:  F J Stevens; E A Myatt; C H Chang; F A Westholm; M Eulitz; D T Weiss; C Murphy; A Solomon; M Schiffer
Journal:  Biochemistry       Date:  1995-08-29       Impact factor: 3.162

10.  The acid-mediated denaturation pathway of transthyretin yields a conformational intermediate that can self-assemble into amyloid.

Authors:  Z Lai; W Colón; J W Kelly
Journal:  Biochemistry       Date:  1996-05-21       Impact factor: 3.162

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  35 in total

1.  Somatic mutations of the L12a gene in V-kappa(1) light chain deposition disease: potential effects on aberrant protein conformation and deposition.

Authors:  R Vidal; F Goñi; F Stevens; P Aucouturier; A Kumar; B Frangione; J Ghiso; G Gallo
Journal:  Am J Pathol       Date:  1999-12       Impact factor: 4.307

2.  Antibody-mediated resolution of light chain-associated amyloid deposits.

Authors:  R Hrncic; J Wall; D A Wolfenbarger; C L Murphy; M Schell; D T Weiss; A Solomon
Journal:  Am J Pathol       Date:  2000-10       Impact factor: 4.307

3.  Optical microscopy of growing insulin amyloid spherulites on surfaces in vitro.

Authors:  Salman S Rogers; Mark R H Krebs; Elizabeth H C Bromley; Erik van der Linden; Athene M Donald
Journal:  Biophys J       Date:  2005-11-04       Impact factor: 4.033

4.  The mechanism of amyloid spherulite formation by bovine insulin.

Authors:  M R H Krebs; E H C Bromley; S S Rogers; A M Donald
Journal:  Biophys J       Date:  2004-12-13       Impact factor: 4.033

5.  Amyloid formation of a protein in the absence of initial unfolding and destabilization of the native state.

Authors:  Gemma Soldi; Francesco Bemporad; Silvia Torrassa; Annalisa Relini; Matteo Ramazzotti; Niccolò Taddei; Fabrizio Chiti
Journal:  Biophys J       Date:  2005-09-16       Impact factor: 4.033

Review 6.  Prevention of amyloid-like aggregation as a driving force of protein evolution.

Authors:  Elodie Monsellier; Fabrizio Chiti
Journal:  EMBO Rep       Date:  2007-08       Impact factor: 8.807

7.  Using empirical phase diagrams to understand the role of intramolecular dynamics in immunoglobulin G stability.

Authors:  Joshua D Ramsey; Michelle L Gill; Tim J Kamerzell; E Shane Price; Sangeeta B Joshi; Steven M Bishop; Cynthia N Oliver; C Russell Middaugh
Journal:  J Pharm Sci       Date:  2009-07       Impact factor: 3.534

8.  AL-Base: a visual platform analysis tool for the study of amyloidogenic immunoglobulin light chain sequences.

Authors:  Kip Bodi; Tatiana Prokaeva; Brian Spencer; Maurya Eberhard; Lawreen H Connors; David C Seldin
Journal:  Amyloid       Date:  2009-03       Impact factor: 7.141

Review 9.  Systemic amyloidoses.

Authors:  Luis M Blancas-Mejía; Marina Ramirez-Alvarado
Journal:  Annu Rev Biochem       Date:  2013-02-28       Impact factor: 23.643

10.  The formation of spherulites by amyloid fibrils of bovine insulin.

Authors:  Mark R H Krebs; Cait E Macphee; Aline F Miller; Iain E Dunlop; Christopher M Dobson; Athene M Donald
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-20       Impact factor: 11.205

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