Literature DB >> 10091121

Ab initio calculations on peptide-derived oxazoles and thiazoles: improved molecular mechanics parameters for the AMBER force field.

C D Boden1, G Pattenden.   

Abstract

Ab initio calculations at the RHF/6-31G* and MP2/6-31G*//RHF/6-31G* levels of theory are performed for 2-methyl-4-carboxamido-oxazoles and -thiazoles, including rotational profiles for the ring-carboxamide bond, which showed the expected conjugation and hydrogen bonding effects. On the basis of these data, newly optimised stretch, bend and torsional parameters for the AMBER* force field are derived, along with CHELPG-fitted partial atomic charges.

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Year:  1999        PMID: 10091121     DOI: 10.1023/a:1008044108821

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  3 in total

1.  Dendroamides, new cyclic hexapeptides from a blue-green alga. Multidrug-resistance reversing activity of dendroamide A.

Authors:  J Ogino; R E Moore; G M Patterson; C D Smith
Journal:  J Nat Prod       Date:  1996-06       Impact factor: 4.050

2.  Stereochemistry of ulapualides, a new family of tris-oxazole-containing macrolide ionophores from marine nudibranchs. A molecular mechanics study.

Authors:  J Maddock; G Pattenden; P G Wight
Journal:  J Comput Aided Mol Des       Date:  1993-10       Impact factor: 3.686

3.  Novel cytotoxic compounds from the ascidian Lissoclinum bistratum.

Authors:  B M Degnan; C J Hawkins; M F Lavin; E J McCaffrey; D L Parry; D J Watters
Journal:  J Med Chem       Date:  1989-06       Impact factor: 7.446

  3 in total

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