Literature DB >> 10084119

Sources of bias in the detection and reporting of p53 mutations in human cancer: analysis of the IARC p53 mutation database.

T Hernandez-Boussard1, R Montesano, P Hainaut.   

Abstract

p53 gene encodes a transcription factor with tumor suppressive properties and to date, somatic mutation of this gene is the most common genetic event in human cancer. A relational database has been developed to facilitate the retrieval and analysis of these mutations at the International Agency for Research on Cancer (IARC) and it currently contains information on over 8000 individual tumors and cell lines. Many factors may influence the detection and reporting of mutations, including selection of tumor samples, study design, choice of methods, and quality control. There is also concern that several biases may affect the way data appear in the literature. Minimizing these biases is an essential methodological issue in the development of mutation data-bases. In this paper, we review and discuss these main sources of bias and make recommendations to authors in order to minimize bias in mutation detection and reporting.

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Year:  1999        PMID: 10084119     DOI: 10.1016/s1050-3862(98)00030-8

Source DB:  PubMed          Journal:  Genet Anal


  4 in total

Review 1.  p53 functional assays: detecting p53 mutations in both the germline and in sporadic tumours.

Authors:  R S Camplejohn; J Rutherford
Journal:  Cell Prolif       Date:  2001-02       Impact factor: 6.831

2.  Databases and QSAR for cancer research.

Authors:  Adeel Malik; Hemajit Singh; Munazah Andrabi; Syed Akhtar Husain; Shandar Ahmad
Journal:  Cancer Inform       Date:  2007-02-15

Review 3.  Interplay between HMGA and TP53 in cell cycle control along tumor progression.

Authors:  Nathalia Meireles Da Costa; Antonio Palumbo; Marco De Martino; Alfredo Fusco; Luis Felipe Ribeiro Pinto; Luiz Eurico Nasciutti
Journal:  Cell Mol Life Sci       Date:  2020-09-12       Impact factor: 9.261

4.  The basal layer in human squamous tumors harbors more UVA than UVB fingerprint mutations: a role for UVA in human skin carcinogenesis.

Authors:  Nita S Agar; Gary M Halliday; Ross StC Barnetson; Honnavara N Ananthaswamy; Mark Wheeler; Alexandra M Jones
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-23       Impact factor: 11.205

  4 in total

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