Literature DB >> 10077568

Transcriptional activation by artificial recruitment in yeast is influenced by promoter architecture and downstream sequences.

L Gaudreau1, M Keaveney, J Nevado, Z Zaman, G O Bryant, K Struhl, M Ptashne.   

Abstract

The idea that recruitment of the transcriptional machinery to a promoter suffices for gene activation is based partly on the results of "artificial recruitment" experiments performed in vivo. Artificial recruitment can be effected by a "nonclassical" activator comprising a DNA-binding domain fused to a component of the transcriptional machinery. Here we show that activation by artificial recruitment in yeast can be sensitive to any of three factors: position of the activator-binding elements, sequence of the promoter, and coding sequences downstream of the promoter. In contrast, classical activators worked efficiently at all promoters tested. In all cases the "artificial recruitment" fusions synergized well with classical activators. A classical activator evidently differs from a nonclassical activator in that the former can touch multiple sites on the transcriptional machinery, and we propose that that difference accounts for the broader spectrum of activity of the typical classical activator. A similar conclusion is reached from studies in mammalian cells in the accompanying paper [Nevado, J., Gaudreau, L., Adam, M. & Ptashne, M. (1999) Proc. Natl. Acad. Sci. USA 96, 2674-2677].

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Year:  1999        PMID: 10077568      PMCID: PMC15826          DOI: 10.1073/pnas.96.6.2668

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

1.  Transcriptional activation by artificial recruitment in mammalian cells.

Authors:  J Nevado; L Gaudreau; M Adam; M Ptashne
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

Review 2.  Chromatin structure and RNA polymerase II connection: implications for transcription.

Authors:  K Struhl
Journal:  Cell       Date:  1996-01-26       Impact factor: 41.582

3.  Functional dissection of the yeast Cyc8-Tup1 transcriptional co-repressor complex.

Authors:  D Tzamarias; K Struhl
Journal:  Nature       Date:  1994-06-30       Impact factor: 49.962

4.  Stimulation of RNA polymerase II transcription initiation by recruitment of TBP in vivo.

Authors:  N Klages; M Strubin
Journal:  Nature       Date:  1995-04-27       Impact factor: 49.962

5.  Connecting a promoter-bound protein to TBP bypasses the need for a transcriptional activation domain.

Authors:  S Chatterjee; K Struhl
Journal:  Nature       Date:  1995-04-27       Impact factor: 49.962

6.  Cyclin-dependent protein kinase and cyclin homologs SSN3 and SSN8 contribute to transcriptional control in yeast.

Authors:  S Kuchin; P Yeghiayan; M Carlson
Journal:  Proc Natl Acad Sci U S A       Date:  1995-04-25       Impact factor: 11.205

7.  Contact with a component of the polymerase II holoenzyme suffices for gene activation.

Authors:  A Barberis; J Pearlberg; N Simkovich; S Farrell; P Reinagel; C Bamdad; G Sigal; M Ptashne
Journal:  Cell       Date:  1995-05-05       Impact factor: 41.582

8.  An RNA polymerase II holoenzyme responsive to activators.

Authors:  A J Koleske; R A Young
Journal:  Nature       Date:  1994-03-31       Impact factor: 49.962

9.  Recruiting TATA-binding protein to a promoter: transcriptional activation without an upstream activator.

Authors:  H Xiao; J D Friesen; J T Lis
Journal:  Mol Cell Biol       Date:  1995-10       Impact factor: 4.272

10.  The transactivation domain of Pho4 is required for nucleosome disruption at the PHO5 promoter.

Authors:  J Svaren; J Schmitz; W Hörz
Journal:  EMBO J       Date:  1994-10-17       Impact factor: 11.598

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  21 in total

1.  A role of transcriptional activators as antirepressors for the autoinhibitory activity of TATA box binding of transcription factor IID.

Authors:  T Kotani; K Banno; M Ikura; A G Hinnebusch; Y Nakatani; M Kawaichi; T Kokubo
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-20       Impact factor: 11.205

2.  Transcriptional activation by artificial recruitment in mammalian cells.

Authors:  J Nevado; L Gaudreau; M Adam; M Ptashne
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

3.  H2A.Z is required for global chromatin integrity and for recruitment of RNA polymerase II under specific conditions.

Authors:  M Adam; F Robert; M Larochelle; L Gaudreau
Journal:  Mol Cell Biol       Date:  2001-09       Impact factor: 4.272

4.  The yeast protein Xtc1 functions as a direct transcriptional repressor.

Authors:  Ana Traven; Lidija Staresincić; Milica Arnerić; Mary Sopta
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

5.  A new method for the selection of protein interactions in mammalian cells.

Authors:  E Rojo-Niersbach; D Morley; S Heck; N Lehming
Journal:  Biochem J       Date:  2000-06-15       Impact factor: 3.857

6.  A target essential for the activity of a nonacidic yeast transcriptional activator.

Authors:  Zhen Lu; Aseem Z Ansari; Xiangyang Lu; Anuja Ogirala; Mark Ptashne
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-25       Impact factor: 11.205

7.  Targeting of Swi/Snf to the yeast GAL1 UAS G requires the Mediator, TAF IIs, and RNA polymerase II.

Authors:  Karine Lemieux; Luc Gaudreau
Journal:  EMBO J       Date:  2004-09-23       Impact factor: 11.598

8.  Fungal mediator tail subunits contain classical transcriptional activation domains.

Authors:  Zhongle Liu; Lawrence C Myers
Journal:  Mol Cell Biol       Date:  2015-02-02       Impact factor: 4.272

9.  Artificial recruitment of TFIID, but not RNA polymerase II holoenzyme, activates transcription in mammalian cells.

Authors:  D R Dorris; K Struhl
Journal:  Mol Cell Biol       Date:  2000-06       Impact factor: 4.272

Review 10.  Using synthetic biology to make cells tomorrow's test tubes.

Authors:  Hernan G Garcia; Robert C Brewster; Rob Phillips
Journal:  Integr Biol (Camb)       Date:  2016-03-08       Impact factor: 2.192

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