Literature DB >> 10074137

The ski7 antiviral protein is an EF1-alpha homolog that blocks expression of non-Poly(A) mRNA in Saccharomyces cerevisiae.

L Benard1, K Carroll, R C Valle, D C Masison, R B Wickner.   

Abstract

We mapped and cloned SKI7, a gene that negatively controls the copy number of L-A and M double-stranded RNA viruses in Saccharomyces cerevisiae. We found that it encodes a nonessential 747-residue protein with similarities to two translation factors, Hbs1p and EF1-alpha. The ski7 mutant was hypersensitive to hygromycin B, a result also suggesting a role in translation. The SKI7 product repressed the expression of nonpolyadenylated [non-poly(A)] mRNAs, whether capped or uncapped, thus explaining why Ski7p inhibits the propagation of the yeast viruses, whose mRNAs lack poly(A). The dependence of the Ski7p effect on 3' RNA structures motivated a study of the expression of capped non-poly(A) luciferase mRNAs containing 3' untranslated regions (3'UTRs) differing in length. In a wild-type strain, increasing the length of the 3'UTR increased luciferase expression due to both increased rates and duration of translation. Overexpression of Ski7p efficiently cured the satellite virus M2 due to a twofold-increased repression of non-poly(A) mRNA expression. Our experiments showed that Ski7p is part of the Ski2p-Ski3p-Ski8p antiviral system because a single ski7 mutation derepresses the expression of non-poly(A) mRNA as much as a quadruple ski2 ski3 ski7 ski8 mutation, and the effect of the overexpression of Ski7p is not obtained unless other SKI genes are functional. ski1/xrn1Delta ski2Delta and ski1/xrn1Delta ski7Delta mutants were viable but temperature sensitive for growth.

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Year:  1999        PMID: 10074137      PMCID: PMC104047     

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  52 in total

Review 1.  Double-stranded RNA viruses of Saccharomyces cerevisiae.

Authors:  R B Wickner
Journal:  Microbiol Rev       Date:  1996-03

2.  Killer systems in Saccharomyces cerevisiae: three distinct modes of exclusion of M2 double-stranded RNA by three species of double-stranded RNA, M1, L-A-E, and L-A-HN.

Authors:  R B Wickner
Journal:  Mol Cell Biol       Date:  1983-04       Impact factor: 4.272

3.  Co-curing of plasmids affecting killer double-stranded RNAs of Saccharomyces cerevisiae: [HOK], [NEX], and the abundance of L are related and further evidence that M1 requires L.

Authors:  S S Sommer; R B Wickner
Journal:  J Bacteriol       Date:  1982-05       Impact factor: 3.490

4.  Genome structure and expression of a defective interfering mutant of the killer virus of yeast.

Authors:  D J Thiele; E M Hannig; M J Leibowitz
Journal:  Virology       Date:  1984-08       Impact factor: 3.616

5.  Chromosomal superkiller mutants of Saccharomyces cerevisiae.

Authors:  A Toh-E; P Guerry; R B Wickner
Journal:  J Bacteriol       Date:  1978-12       Impact factor: 3.490

6.  Evidence for instability of mRNAs containing AUUUA motifs mediated through translation-dependent assembly of a > 20S degradation complex.

Authors:  S Savant-Bhonsale; D W Cleveland
Journal:  Genes Dev       Date:  1992-10       Impact factor: 11.361

7.  Synthetic lethality of sep1 (xrn1) ski2 and sep1 (xrn1) ski3 mutants of Saccharomyces cerevisiae is independent of killer virus and suggests a general role for these genes in translation control.

Authors:  A W Johnson; R D Kolodner
Journal:  Mol Cell Biol       Date:  1995-05       Impact factor: 4.272

8.  Plasmids controlled exclusion of the K2 killer double-stranded RNA plasmid of yeast.

Authors:  R B Wickner
Journal:  Cell       Date:  1980-08       Impact factor: 41.582

9.  Physical maps of the six smallest chromosomes of Saccharomyces cerevisiae at a resolution of 2.6 kilobase pairs.

Authors:  L Riles; J E Dutchik; A Baktha; B K McCauley; E C Thayer; M P Leckie; V V Braden; J E Depke; M V Olson
Journal:  Genetics       Date:  1993-05       Impact factor: 4.562

10.  Mof4-1 is an allele of the UPF1/IFS2 gene which affects both mRNA turnover and -1 ribosomal frameshifting efficiency.

Authors:  Y Cui; J D Dinman; S W Peltz
Journal:  EMBO J       Date:  1996-10-15       Impact factor: 11.598

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  26 in total

1.  A cis-acting element known to block 3' mRNA degradation enhances expression of polyA-minus mRNA in wild-type yeast cells and phenocopies a ski mutant.

Authors:  J T Brown; A W Johnson
Journal:  RNA       Date:  2001-11       Impact factor: 4.942

2.  Ski7p G protein interacts with the exosome and the Ski complex for 3'-to-5' mRNA decay in yeast.

Authors:  Y Araki; S Takahashi; T Kobayashi; H Kajiho; S Hoshino; T Katada
Journal:  EMBO J       Date:  2001-09-03       Impact factor: 11.598

3.  Function of the ski4p (Csl4p) and Ski7p proteins in 3'-to-5' degradation of mRNA.

Authors:  A van Hoof; R R Staples; R E Baker; R Parker
Journal:  Mol Cell Biol       Date:  2000-11       Impact factor: 4.272

4.  Conserved functions of yeast genes support the duplication, degeneration and complementation model for gene duplication.

Authors:  Ambro van Hoof
Journal:  Genetics       Date:  2005-06-18       Impact factor: 4.562

5.  A genomic screen in yeast reveals novel aspects of nonstop mRNA metabolism.

Authors:  Marenda A Wilson; Stacie Meaux; Ambro van Hoof
Journal:  Genetics       Date:  2007-07-29       Impact factor: 4.562

Review 6.  Diverse aberrancies target yeast mRNAs to cytoplasmic mRNA surveillance pathways.

Authors:  Marenda A Wilson; Stacie Meaux; Ambro van Hoof
Journal:  Biochim Biophys Acta       Date:  2008-05-23

7.  The yeast antiviral proteins Ski2p, Ski3p, and Ski8p exist as a complex in vivo.

Authors:  J T Brown; X Bai; A W Johnson
Journal:  RNA       Date:  2000-03       Impact factor: 4.942

Review 8.  Viruses and prions of Saccharomyces cerevisiae.

Authors:  Reed B Wickner; Tsutomu Fujimura; Rosa Esteban
Journal:  Adv Virus Res       Date:  2013       Impact factor: 9.937

Review 9.  Ribosome-based quality control of mRNA and nascent peptides.

Authors:  Carrie L Simms; Erica N Thomas; Hani S Zaher
Journal:  Wiley Interdiscip Rev RNA       Date:  2016-05-18       Impact factor: 9.957

10.  Inhibition of 5' to 3' mRNA degradation under stress conditions in Saccharomyces cerevisiae: from GCN4 to MET16.

Authors:  Lionel Benard
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

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