Literature DB >> 10066487

In situ methods for assessment of microorganisms and their activities.

R Amann1, M Kühl.   

Abstract

Recent technical developments in the field of molecular biology and microsensors are beginning to enable microbiologists to study the abundance, localization and activity of microorganisms in situ. The various new methods on their own bear high potential but it is the combination of studies on structure and function of microbial communities that will yield the most detailed insights in the way microorganisms operate in nature.

Mesh：

Year:  1998        PMID： 10066487     DOI： 10.1016/s1369-5274(98)80041-6

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN： 1369-5274            Impact factor:   7.934


  12 in total

1.  Microscale distribution of populations and activities of Nitrosospira and Nitrospira spp. along a macroscale gradient in a nitrifying bioreactor: quantification by in situ hybridization and the use of microsensors.

Authors:  A Schramm; D de Beer; J C van den Heuvel; S Ottengraf; R Amann
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

2.  Colonization pattern of the biocontrol strain Pseudomonas chlororaphis MA 342 on barley seeds visualized by using green fluorescent protein.

Authors:  R Tombolini; D J van der Gaag; B Gerhardson; J K Jansson
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

Review 3.  Measurement of bacterial gene expression in vivo.

Authors:  I Hautefort; J C Hinton
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2000-05-29       Impact factor: 6.237

4.  Cyanobacterial ecotypes in different optical microenvironments of a 68 degrees C hot spring mat community revealed by 16S-23S rRNA internal transcribed spacer region variation.

Authors:  Mike J Ferris; Michael Kühl; Andrea Wieland; David M Ward
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

5.  Behavior of microbial communities developed in the presence/reduced level of soluble microbial products.

Authors:  K B Chipasa; K Medrzycka
Journal:  J Ind Microbiol Biotechnol       Date:  2004-10-06       Impact factor: 3.346

6.  Endophytic colonization of Vitis vinifera L. by plant growth-promoting bacterium Burkholderia sp. strain PsJN.

Authors:  Stéphane Compant; Birgit Reiter; Angela Sessitsch; Jerzy Nowak; Christophe Clément; Essaïd Ait Barka
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

7.  Correlation between anammox activity and microscale distribution of nitrite in a subtropical mangrove sediment.

Authors:  Rikke Louise Meyer; Nils Risgaard-Petersen; Diane Elizabeth Allen
Journal:  Appl Environ Microbiol       Date:  2005-10       Impact factor: 4.792

8.  A polyphasic approach To study the diversity and vertical distribution of sulfur-oxidizing thiomicrospira species in coastal sediments of the german wadden Sea

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-12       Impact factor: 4.792

Review 9.  Enumeration of methanogens with a focus on fluorescence in situ hybridization.

Authors:  Sanjay Kumar; Sumit Singh Dagar; Ashok Kumar Mohanty; Sunil Kumar Sirohi; Monica Puniya; Ramesh C Kuhad; K P S Sangu; Gareth Wyn Griffith; Anil Kumar Puniya
Journal:  Naturwissenschaften       Date:  2011-04-08

10.  Bacterioplankton community structure in a maritime antarctic oligotrophic lake during a period of holomixis, as determined by denaturing gradient gel electrophoresis (DGGE) and fluorescence in situ hybridization (FISH).

Authors:  D A Pearce
Journal:  Microb Ecol       Date:  2003-05-13       Impact factor: 4.552
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