Literature DB >> 10066165

A glycyl radical site in the crystal structure of a class III ribonucleotide reductase.

D T Logan1, J Andersson, B M Sjöberg, P Nordlund.   

Abstract

Ribonucleotide reductases catalyze the reduction of ribonucleotides to deoxyribonucleotides. Three classes have been identified, all using free-radical chemistry but based on different cofactors. Classes I and II have been shown to be evolutionarily related, whereas the origin of anaerobic class III has remained elusive. The structure of a class III enzyme suggests a common origin for the three classes but shows differences in the active site that can be understood on the basis of the radical-initiation system and source of reductive electrons, as well as a unique protein glycyl radical site. A possible evolutionary relationship between early deoxyribonucleotide metabolism and primary anaerobic metabolism is suggested.

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Year:  1999        PMID: 10066165     DOI: 10.1126/science.283.5407.1499

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  55 in total

1.  High-field EPR detection of a disulfide radical anion in the reduction of cytidine 5'-diphosphate by the E441Q R1 mutant of Escherichia coli ribonucleotide reductase.

Authors:  C C Lawrence; M Bennati; H V Obias; G Bar; R G Griffin; J Stubbe
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

2.  Structure of the N-terminal region of Haemophilus influenzae H10017: implications for function.

Authors:  L Yu; J Mack; P Hajduk; S W Fesik
Journal:  J Biomol NMR       Date:  2001-06       Impact factor: 2.835

3.  Crystal structure of coproporphyrinogen III oxidase reveals cofactor geometry of Radical SAM enzymes.

Authors:  Gunhild Layer; Jürgen Moser; Dirk W Heinz; Dieter Jahn; Wolf-Dieter Schubert
Journal:  EMBO J       Date:  2003-12-01       Impact factor: 11.598

4.  Structure and reactivity of the N-acetyl-cysteine radical cation and anion: does radical migration occur?

Authors:  Sandra Osburn; Giel Berden; Jos Oomens; Richard A J O'Hair; Victor Ryzhov
Journal:  J Am Soc Mass Spectrom       Date:  2011-07-16       Impact factor: 3.109

5.  Crystallization and preliminary X-ray analysis of the small subunit (R2F) of native ribonucleotide reductase from Corynebacterium ammoniagenes.

Authors:  Hideaki Ogata; Patrick Stolle; Matthias Stehr; Georg Auling; Wolfgang Lubitz
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-08-20

6.  Closing the circle on ribonucleotide reductases.

Authors:  Derek T Logan
Journal:  Nat Struct Mol Biol       Date:  2011-03       Impact factor: 15.369

7.  Structural basis for glycyl radical formation by pyruvate formate-lyase activating enzyme.

Authors:  Jessica L Vey; Jian Yang; Meng Li; William E Broderick; Joan B Broderick; Catherine L Drennan
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-13       Impact factor: 11.205

8.  The catalytic mechanism for aerobic formation of methane by bacteria.

Authors:  Siddhesh S Kamat; Howard J Williams; Lawrence J Dangott; Mrinmoy Chakrabarti; Frank M Raushel
Journal:  Nature       Date:  2013-04-24       Impact factor: 49.962

9.  Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation.

Authors:  Hai Xu; Catherine Faber; Tomoaki Uchiki; James W Fairman; Joseph Racca; Chris Dealwis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-06       Impact factor: 11.205

10.  Structures of eukaryotic ribonucleotide reductase I define gemcitabine diphosphate binding and subunit assembly.

Authors:  Hai Xu; Catherine Faber; Tomoaki Uchiki; Joseph Racca; Chris Dealwis
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-06       Impact factor: 11.205

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