Literature DB >> 10053016

A genomewide analysis provides evidence for novel linkages in inflammatory bowel disease in a large European cohort.

J Hampe1, S Schreiber, S H Shaw, K F Lau, S Bridger, A J Macpherson, L R Cardon, H Sakul, T J Harris, A Buckler, J Hall, P Stokkers, S J van Deventer, P Nürnberg, M M Mirza, J C Lee, J E Lennard-Jones, C G Mathew, M E Curran.   

Abstract

Inflammatory bowel disease (IBD) is characterized by a chronic relapsing intestinal inflammation, typically starting in early adulthood. IBD is subdivided into two subtypes, on the basis of clinical and histologic features: Crohn disease and ulcerative colitis (UC). Previous genomewide searches identified regions harboring susceptibility loci on chromosomes 1, 3, 4, 7, 12, and 16. To expand our understanding of the genetic risk profile, we performed a 9-cM genomewide search for susceptibility loci in 268 families containing 353 affected sibling pairs. Previous linkages on chromosomes 12 and 16 were replicated, and the chromosome 4 linkage was extended in this sample. New suggestive evidence for autosomal linkages was observed on chromosomes 1, 6, 10, and 22, with LOD scores of 2.08, 2.07, 2.30, and 1.52, respectively. A maximum LOD score of 1.76 was observed on the X chromosome, for UC, which is consistent with the clinical association of IBD with Ullrich-Turner syndrome. The linkage finding on chromosome 6p is of interest, given the possible contribution of human leukocyte antigen and tumor necrosis-factor genes in IBD. This genomewide linkage scan, done with a large family cohort, has confirmed three previous IBD linkages and has provided evidence for five additional regions that may harbor IBD predisposition genes.

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Year:  1999        PMID: 10053016      PMCID: PMC1377799          DOI: 10.1086/302294

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  65 in total

1.  Analysis of the contribution of HLA genes to genetic predisposition in inflammatory bowel disease.

Authors:  I Naom; J Lee; D Ford; S J Bowman; J S Lanchbury; I Haris; S V Hodgson; D Easton; J Lennard-Jones; C G Mathew
Journal:  Am J Hum Genet       Date:  1996-07       Impact factor: 11.025

2.  Limits on fine mapping of complex traits.

Authors:  L Kruglyak; E S Lander
Journal:  Am J Hum Genet       Date:  1996-05       Impact factor: 11.025

3.  Juvenile rheumatoid arthritis, Crohn's disease and Turner's syndrome: a novel association.

Authors:  R Scarpa; E Lubrano; F Castiglione; F Morace; P R Ames; P Oriente
Journal:  Clin Exp Rheumatol       Date:  1996 Jul-Aug       Impact factor: 4.473

Review 4.  Environmental risk factors in inflammatory bowel disease.

Authors:  I Koutroubakis; O N Manousos; S G Meuwissen; A S Pena
Journal:  Hepatogastroenterology       Date:  1996 Mar-Apr

5.  Familial aggregation in Crohn's disease: increased age-adjusted risk and concordance in clinical characteristics.

Authors:  M Peeters; H Nevens; F Baert; M Hiele; A M de Meyer; R Vlietinck; P Rutgeerts
Journal:  Gastroenterology       Date:  1996-09       Impact factor: 22.682

6.  Clinical patterns of familial inflammatory bowel disease.

Authors:  J Satsangi; C Grootscholten; H Holt; D P Jewell
Journal:  Gut       Date:  1996-05       Impact factor: 23.059

7.  Genetic analysis of inflammatory bowel disease in a large European cohort supports linkage to chromosomes 12 and 16.

Authors:  M E Curran; K F Lau; J Hampe; S Schreiber; S Bridger; A J Macpherson; L R Cardon; H Sakul; T J Harris; P Stokkers; S J Van Deventer; M Mirza; A Raedler; W Kruis; U Meckler; D Theuer; T Herrmann; P Gionchetti; J Lee; C Mathew; J Lennard-Jones
Journal:  Gastroenterology       Date:  1998-11       Impact factor: 22.682

8.  An increased risk of Crohn's disease in individuals who inherit the HLA class II DRB3*0301 allele.

Authors:  D G Forcione; B Sands; K J Isselbacher; A Rustgi; D K Podolsky; S Pillai
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-14       Impact factor: 11.205

9.  Two stage genome-wide search in inflammatory bowel disease provides evidence for susceptibility loci on chromosomes 3, 7 and 12.

Authors:  J Satsangi; M Parkes; E Louis; L Hashimoto; N Kato; K Welsh; J D Terwilliger; G M Lathrop; J I Bell; D P Jewell
Journal:  Nat Genet       Date:  1996-10       Impact factor: 38.330

10.  The interferon-gamma gene as a positional and functional candidate gene for inflammatory bowel disease.

Authors:  J Hampe; B Hermann; S Bridger; A J MacPherson; C G Mathew; S Schreiber
Journal:  Int J Colorectal Dis       Date:  1998       Impact factor: 2.571

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  87 in total

1.  Fine mapping of the chromosome 3p susceptibility locus in inflammatory bowel disease.

Authors:  J Hampe; N J Lynch; S Daniels; S Bridger; A J Macpherson; P Stokkers; A Forbes; J E Lennard-Jones; C G Mathew; M E Curran; S Schreiber
Journal:  Gut       Date:  2001-02       Impact factor: 23.059

2.  International collaboration provides convincing linkage replication in complex disease through analysis of a large pooled data set: Crohn disease and chromosome 16.

Authors:  J Cavanaugh
Journal:  Am J Hum Genet       Date:  2001-04-12       Impact factor: 11.025

3.  High-density genome scan in Crohn disease shows confirmed linkage to chromosome 14q11-12.

Authors:  R H Duerr; M M Barmada; L Zhang; R Pfützer; D E Weeks
Journal:  Am J Hum Genet       Date:  2000-04-03       Impact factor: 11.025

4.  The IBD2 locus shows linkage heterogeneity between ulcerative colitis and Crohn disease.

Authors:  M Parkes; M M Barmada; J Satsangi; D E Weeks; D P Jewell; R H Duerr
Journal:  Am J Hum Genet       Date:  2000-11-10       Impact factor: 11.025

Review 5.  Clinical aspects and pathophysiology of inflammatory bowel disease.

Authors:  Barbara A Hendrickson; Ranjana Gokhale; Judy H Cho
Journal:  Clin Microbiol Rev       Date:  2002-01       Impact factor: 26.132

6.  Evidence for a NOD2-independent susceptibility locus for inflammatory bowel disease on chromosome 16p.

Authors:  Jochen Hampe; Henning Frenzel; Muddassar M Mirza; Peter J P Croucher; Andrew Cuthbert; Silvia Mascheretti; Klaus Huse; Matthias Platzer; Stephen Bridger; Birgit Meyer; Peter Nürnberg; Pieter Stokkers; Michael Krawczak; Christopher G Mathew; Mark Curran; Stefan Schreiber
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-18       Impact factor: 11.205

7.  Genomewide scans of complex human diseases: true linkage is hard to find.

Authors:  J Altmüller; L J Palmer; G Fischer; H Scherb; M Wjst
Journal:  Am J Hum Genet       Date:  2001-09-14       Impact factor: 11.025

Review 8.  Genetic aspects of inflammatory bowel disease: how far have we come, and where are we heading?

Authors:  J Cho
Journal:  Curr Gastroenterol Rep       Date:  1999-12

9.  Association of susceptibility locus for inflammatory bowel disease on chromosome 16 with both ulcerative colitis and Crohn's disease.

Authors:  M Farmer; L Hunt; M R Eichenberger; R E Petras; J E Janosky; S Galandiuk
Journal:  Dig Dis Sci       Date:  2001-03       Impact factor: 3.199

10.  Genetic evidence for interaction of the 5q31 cytokine locus and the CARD15 gene in Crohn disease.

Authors:  Muddassar M Mirza; Sheila A Fisher; Kathy King; Andrew P Cuthbert; Jochen Hampe; Jeremy Sanderson; John Mansfield; Peter Donaldson; Andrew J S Macpherson; Alastair Forbes; Stefan Schreiber; Cathryn M Lewis; Christopher G Mathew
Journal:  Am J Hum Genet       Date:  2003-03-03       Impact factor: 11.025

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