Literature DB >> 10049174

Evaluation of forcefields for molecular mechanics/dynamics calculations involving halogenated anesthetics.

J R Trudell1, E Bertaccini.   

Abstract

(1) Successful application of molecular mechanics and molecular dynamics calculations to the binding of halogenated anesthetics requires forcefields with correct parameters for halocarbons. (2) Unfortunately, our survey of six popular forcefields revealed that some of them provide a very poor representation of electrostatic interactions for the halogens. (3) This problem is due to poor or missing assignments of partial atomic charges to the halogen atoms. (4) We describe the forcefields most appropriate for use with halogenated anesthetics and suggest a general method for editing the assignment of partial atomic charges by performing an initial quantum mechanics calculation.

Entities:  

Mesh:

Substances:

Year:  1998        PMID: 10049174     DOI: 10.1016/s0378-4274(98)00215-x

Source DB:  PubMed          Journal:  Toxicol Lett        ISSN: 0378-4274            Impact factor:   4.372


  2 in total

1.  General anesthetic binding to gramicidin A: the structural requirements.

Authors:  P Tang; R G Eckenhoff; Y Xu
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

Review 2.  The Molecular Mechanisms of Anesthetic Action: Updates and Cutting Edge Developments from the Field of Molecular Modeling.

Authors:  Edward J Bertaccini
Journal:  Pharmaceuticals (Basel)       Date:  2010-07-08
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.