Literature DB >> 10047507

NMR spectroscopy in structure-based drug design.

G C Roberts1.   

Abstract

NMR methods for the study of motion in proteins continue to improve, and a number of studies of protein-ligand complexes relevant to drug design have been reported over the past year, for example, studies of fatty-acid-binding protein and SH2 and SH3 domains. These studies have begun to give a picture of the structural dynamics of protein-ligand complexes and to relate the changes in dynamics on ligand binding to the origins of specificity. NMR is also valuable in locating binding sites, both qualitatively from changes in chemical shift and more precisely from distances measured from relaxation effects. The conformation of the bound ligand can provide useful information for drug design, and over the past year improvements in methods have made it easier to obtain quantitative information from transferred nuclear Overhauser effect experiments.

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Year:  1999        PMID: 10047507     DOI: 10.1016/s0958-1669(99)80008-1

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  7 in total

1.  NMR-restrained docking of a peptidic inhibitor to the N-terminal domain of the phosphoenolpyruvate:sugar phosphotransferase enzyme I.

Authors:  D Rognan; S Mukhija; G Folkers; O Zerbe
Journal:  J Comput Aided Mol Des       Date:  2001-02       Impact factor: 3.686

2.  Backbone dynamics of a bacterially expressed peptide from the receptor binding domain of Pseudomonas aeruginosa pilin strain PAK from heteronuclear 1H-15N NMR spectroscopy.

Authors:  A P Campbell; L Spyracopoulos; R T Irvin; B D Sykes
Journal:  J Biomol NMR       Date:  2000-07       Impact factor: 2.835

3.  Beyond structure: Deciphering site-specific dynamics in proteins from double histidine-based EPR measurements.

Authors:  Kevin Singewald; James A Wilkinson; Zikri Hasanbasri; Sunil Saxena
Journal:  Protein Sci       Date:  2022-07       Impact factor: 6.993

4.  Substituents on etoposide that interact with human topoisomerase IIalpha in the binary enzyme-drug complex: contributions to etoposide binding and activity.

Authors:  Ryan P Bender; Michael J Jablonksy; Mohammad Shadid; Ian Romaine; Norma Dunlap; Clemens Anklin; David E Graves; Neil Osheroff
Journal:  Biochemistry       Date:  2008-03-21       Impact factor: 3.162

5.  Topoisomerase II - drug interaction domains: identification of substituents on etoposide that interact with the enzyme.

Authors:  Amy M Wilstermann; Ryan P Bender; Murrell Godfrey; Sungjo Choi; Clemens Anklin; David B Berkowitz; Neil Osheroff; David E Graves
Journal:  Biochemistry       Date:  2007-06-20       Impact factor: 3.162

6.  Getting the chemistry right: protonation, tautomers and the importance of H atoms in biological chemistry.

Authors:  Ben Bax; Chun Wa Chung; Colin Edge
Journal:  Acta Crystallogr D Struct Biol       Date:  2017-02-01       Impact factor: 7.652

Review 7.  The Development of Rapastinel (Formerly GLYX-13); A Rapid Acting and Long Lasting Antidepressant.

Authors:  Joseph R Moskal; Jeffrey S Burgdorf; Patric K Stanton; Roger A Kroes; John F Disterhoft; Ronald M Burch; M Amin Khan
Journal:  Curr Neuropharmacol       Date:  2017       Impact factor: 7.363

  7 in total

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