Literature DB >> 10045099

Multicanonical ensemble: A new approach to simulate first-order phase transitions.

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Abstract

Year:  1992        PMID： 10045099     DOI： 10.1103/PhysRevLett.68.9

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN： 0031-9007            Impact factor:   9.161


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  67 in total

1.  De novo simulations of the folding thermodynamics of the GCN4 leucine zipper.

Authors:  D Mohanty; A Kolinski; J Skolnick
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

2.  Understanding beta-hairpin formation.

Authors:  A R Dinner; T Lazaridis; M Karplus
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

3.  Protein folding mediated by solvation: water expulsion and formation of the hydrophobic core occur after the structural collapse.

Authors:  Margaret S Cheung; Angel E García; José N Onuchic
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

4.  Free-energy landscape of a chameleon sequence in explicit water and its inherent alpha/beta bifacial property.

Authors:  Kazuyoshi Ikeda; Junichi Higo
Journal:  Protein Sci       Date:  2003-11       Impact factor: 6.725

5.  Multiplexed-replica exchange molecular dynamics method for protein folding simulation.

Authors:  Young Min Rhee; Vijay S Pande
Journal:  Biophys J       Date:  2003-02       Impact factor: 4.033

6.  Hydrophobic core formation and dehydration in protein folding studied by generalized-ensemble simulations.

Authors:  Takao Yoda; Yuji Sugita; Yuko Okamoto
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

7.  Multiscale methods for computational RNA enzymology.

Authors:  Maria T Panteva; Thakshila Dissanayake; Haoyuan Chen; Brian K Radak; Erich R Kuechler; George M Giambaşu; Tai-Sung Lee; Darrin M York
Journal:  Methods Enzymol       Date:  2015-01-22       Impact factor: 1.600

8.  Molecular mechanism for stabilizing a short helical peptide studied by generalized-ensemble simulations with explicit solvent.

Authors:  Yuji Sugita; Yuko Okamoto
Journal:  Biophys J       Date:  2005-03-04       Impact factor: 4.033

9.  Coarse-grained strategy for modeling protein stability in concentrated solutions. II: phase behavior.

Authors:  Vincent K Shen; Jason K Cheung; Jeffrey R Errington; Thomas M Truskett
Journal:  Biophys J       Date:  2005-12-30       Impact factor: 4.033

10.  A New Maximum Likelihood Approach for Free Energy Profile Construction from Molecular Simulations.

Authors:  Tai-Sung Lee; Brian K Radak; Anna Pabis; Darrin M York
Journal:  J Chem Theory Comput       Date:  2012-12-12       Impact factor: 6.006
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